KEGG   Strongylocentrotus purpuratus (purple sea urchin): 583036
Entry
583036            CDS       T01019                                 
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spu03400]
    583036
DNA repair and recombination proteins [BR:spu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     583036
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     583036
SSDB
Motif
Pfam: zf-CCHH FHA FHA_2 Yop-YscD_cpl oligo_HPY
Other DBs
NCBI-GeneID: 583036
NCBI-ProteinID: XP_030854210
LinkDB
Position
Unknown
AA seq 672 aa
MSGVELKPINDAGGSNILLPLGKTNLGRGSFFEIADKRVSRNHAVLEVEDGKIRVMPIHT
NPTFFHGAGGTKLAPLTKDVWQDLKIGDRIALTPDEHIFEVVIDDRPIVQETQNPRLSAE
GVSPMKQTSPFKQTTSPSSHRNNGVENGQSKEEDNGGVKEKSTEKEGESSPATSIEGDDT
RDSTTDGKNTTVEKDKSSSKVEETEEPDKQEEGESKHDDKSNKGPGTVVLGDTEIALPVQ
KERTLPAWMAAPPKAEAKRATTTGTPAKKASHNEDTATPQKRGRGRPAGGTKATPQAKKT
PTQAKARARKYVDDDDEDYLSEDDKPAPKKAKTSRSQRGSAKVASYAEDEYDALDEEWIA
SDVDDDGSDWEMESQSQSHKKGKGKGKSPKGKFVSPRKRGRRKKYAQSSEEEEWSEEEAY
VPRPSKRRASSTSNSQPTGQAKRGRKARQDSDSSEDEEEYVPKQTKRTPAKAPAKAPAKA
PAKAKKDSGGNKKHDVSSDEDDDDDEAPKKKPEKTKKPKSCQFGKRCYRKSAAHIAEYCH
PGDPDYRSDGDEGDEEDDYDRPECEYGTSCYRKSDEHKTFYKHTKPPPRPKREAAQKVLK
TAGFSDDEEDDDEPNTYDRTDSFLNDDVSDSASVPAKQSDDSDWDPTEGSQDLRDLQKDA
KEFMGNKKMQKT
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgtcaggcgttgagctgaagcctatcaacgatgcaggtggatcaaacattcttcttccg
ttgggaaaaacgaacttaggaaggggctctttctttgagattgcagataaacgtgtttcc
agaaatcatgccgttcttgaagtggaagatgggaaaatcagagtcatgcctattcatacc
aaccccacattcttccacggtgcaggaggcaccaagttggcacccttaaccaaggatgta
tggcaagacctcaagattggagatcgcattgctctcacgcctgatgaacacatctttgaa
gtggttattgatgacagacctatagtacaagagacccaaaatcctagactttctgctgaa
ggagtctcccccatgaagcaaacttcaccattcaagcagactacatcaccctcatcgcat
cgcaacaatggagtggaaaatggccagtctaaagaagaggataatggtggtgtcaaagag
aaatcaaccgaaaaagaaggagaaagttcacctgctacatcaattgaaggcgatgatacc
agagattctaccacagatggtaaaaatactactgtagaaaaagataaatccagctcaaag
gtggaggaaacagaggaaccagataaacaagaggaaggggaatctaaacatgatgataaa
tcaaacaagggacctggcacggtggtgcttggcgatactgagatagcacttccagtgcag
aaagagaggacactcccagcctggatggccgctcctcccaaagcagaagcaaaacgtgca
accaccacagggaccccagccaagaaagcatcccataatgaagacactgccacaccacag
aaaagaggacgaggaaggcctgctggtggtacaaaagctacacctcaagccaagaagaca
cctacccaggctaaagcacgggcaagaaaatatgtggatgatgacgatgaagactacctg
tctgaagacgataagcctgcccccaagaaagccaaaacctcgagatctcagagggggtct
gctaaggtagcgtcgtacgctgaggatgaatatgatgccttggatgaagagtggatcgca
tctgatgtggacgatgatggcagcgattgggagatggaatcacagtcacaatcacataaa
aagggcaagggcaagggaaaatctccaaaaggtaaatttgtgagtcccagaaagcggggg
agacgcaagaagtatgcacaatctagtgaagaagaggaatggagcgaggaagaagcctac
gtgccccgcccttccaaacgtcgagcatcctcaacctccaactcacaacctacaggacaa
gcgaagagaggaagaaaggcccgacaagacagtgattctagtgaggatgaggaggagtat
gtaccaaaacaaaccaaaaggactcctgcaaaagctcctgcaaaagctcctgcaaaagct
cctgcaaaagcgaaaaaggattctggtgggaataaaaaacatgatgtgagtagcgatgaa
gatgatgatgatgatgaagcaccgaagaagaaaccagagaaaacaaagaagcccaaatct
tgccagtttggaaaacgctgttacagaaaaagtgccgctcacattgcagagtattgccat
ccaggagatccggactaccgatcagatggagatgaaggagatgaagaagatgattatgac
aggcctgagtgtgaatatggaacatcttgctataggaaaagtgatgaacacaagacattt
tataagcacactaagccaccacccagacccaagagagaggcagcccaaaaagtcttgaag
acggcaggattcagcgacgatgaagaggatgatgatgaacccaacacgtacgaccgcact
gatagtttcttgaacgatgatgtctcggactcagcctctgtgcctgcaaagcagtctgat
gattcagactgggatccaacagagggtagtcaagatttgagagaccttcagaaagatgcc
aaggagtttatgggcaacaagaagatgcagaagacatag

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