Strongylocentrotus purpuratus (purple sea urchin): 762568
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Entry
762568 CDS
T01019
Name
(RefSeq) probable Werner syndrome ATP-dependent helicase homolog 1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
762568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
762568
03400 DNA repair and recombination proteins [BR:
spu03400
]
762568
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
762568
Messenger RNA biogenesis [BR:
spu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
762568
DNA repair and recombination proteins [BR:
spu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
762568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2639
Motif
Other DBs
NCBI-GeneID:
762568
NCBI-ProteinID:
XP_001198247
UniProt:
A0A7M7PAI9
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
METRMLKEVVDDVLGSTFVLKQKQESMLISAAKGNHTMGILPTGYGKSLIYALHAPLLNK
LNPQKTHITLVVSPLKSLMLDQVRRWKNLGIRTAAILGHSGHDMDRETENDLMNGGTDLV
FTSPEAILSPKWWQWVRKFQNRISLLVLDEVHCFTKWGLTFREEYLRTTSLTSRLACPIM
LLTATATNRMVTEILQNLNLRREEVEIFAAIPNRPNIHLSVVPVKDKFEAIGWYLDELKE
KGVDAAKTIIYARQIDHVAELYTWLNESLAESAHAPGPGQSCSVESRLIEMYHASTDSKS
QERICRNFSTEGSKLRCVVATIAFGLGVDIADIDQVIHWGCPSDVLCYWQETGRCARDGR
PGKAIMYLPPFSVNKRWVDEDMRDLVQSSRCIRKSVLNTLFVHGMEKDNVQVMSCCSVCD
SAK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgagaatgctcaaagaagttgtggatgatgtgctcggaagtacttttgtactg
aaacaaaaacaggagtccatgctcataagcgctgccaaaggaaatcacaccatggggatc
cttcccactggatacggaaaaagtttgatttatgccctccacgcaccacttttgaacaaa
ctgaatccacagaaaacacacataaccctcgtagtaagtccgcttaaaagtctaatgctg
gaccaggtgcgcagatggaagaatcttggcatcagaactgcggccattcttggccattca
ggtcatgacatggacagggagactgaaaacgacctgatgaatggagggacagacctcgtt
tttacttccccggaggccatcctgtcccctaagtggtggcaatgggtgcggaagtttcaa
aacaggatttcgttgctggtgctagatgaggttcactgctttacaaaatggggtcttaca
ttcagggaggagtacctccggaccacatctttgacatccaggctggcatgccctataatg
cttcttacagccacggcaacaaacagaatggtcacagaaatacttcaaaacctgaatctc
cgcagggaagaagtagaaatattcgccgctattcccaacagaccaaacattcatctatca
gtggttccggtgaaggacaagtttgaagccattggatggtacttggatgaattaaaggag
aagggtgtcgatgctgcaaaaaccatcatttatgcacgacaaatcgaccacgttgctgaa
ctctacacatggctcaacgaaagcctcgccgagtccgcccatgctccaggaccagggcag
tcttgcagtgtggaaagtagactgatcgaaatgtaccacgcatcaacggactcaaagagt
caggaacgaatatgtcgtaacttttccaccgaaggttctaagctgcgctgcgttgtagca
acaatagcattcggtttgggtgtcgacatcgccgacattgatcaggttatccactgggga
tgccctagtgatgtcctctgctattggcaagaaacaggccgatgcgcgagggatggaaga
cccggaaaagccattatgtatctgccacccttttcagtcaacaagagatgggttgatgaa
gacatgagggaccttgtccaatcatcccgctgcatccggaaatcggtgttgaacacgctc
ttcgtgcatggcatggaaaaggacaatgtacaggtgatgtcatgctgctcagtttgcgac
agtgctaagtaa
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