Sphingobium sp. YG1: YGS_C1P2201
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Entry
YGS_C1P2201 CDS
T05858
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YGS_C1P2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spyg03021
]
YGS_C1P2201
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P2201
Enzymes [BR:
spyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YGS_C1P2201
Transcription machinery [BR:
spyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YGS_C1P2201
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YGS_C1P2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
BBD00946
UniProt:
A0A2Z6AGC3
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All DBs
Position
1:2352412..2353461
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AA seq
349 aa
AA seq
DB search
MKNWQELKKPSSLEIKASGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAVTSI
KIENVLHEFSSLAGVREDVTDIVLNIKQVALRMEGEGPKRLQLSATGPAVVKAGDISVVG
DIEVMNPDLIICHLDQGATLNMELTADVGKGYVPAVANRPADAPIGLIPIDALYSPVRQV
AYKVDNTRVGQELDYDKLSLTLETDGTVTPEDAVAYAARILQDQLQLFVHFEDALPAAAP
AAGHTAAAASEGESDTNQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEML
RTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactggcaggaattgaagaagcccagcagccttgagatcaaggcgtcgggcgac
ggcaagcgtaaggcgaccttcgttgccgaaccgctggagcgcggcttcggcctgacgctc
ggcaacgcgctgcgtcgggttcttctgtcctcgcttcagggcgcggcggtcacctcgatc
aagatcgagaacgtcctgcacgaattctcgtcgctcgccggcgtgcgtgaagacgtcacc
gacatcgtcctgaacatcaagcaggtcgcgctgcgcatggaaggcgaaggccccaagcgt
cttcagctgtccgccaccggcccggccgtggtcaaggctggcgacatcagcgttgttggc
gacatcgaagtgatgaacccggacctgatcatctgccatctggaccagggcgcgacgctc
aacatggaactgaccgctgacgtcggcaagggctatgtccccgccgtcgccaaccgtccg
gcagatgcgcccatcggccttatcccgatcgacgcgctctactcgccggtccgccaggtc
gcctacaaggtggataacacccgcgtcggccaggaactggactatgacaagctgtcgctg
acgctcgaaaccgacggcaccgtgacgccggaagatgcagtggcctatgccgcccgcatc
cttcaggaccagctccagctgttcgtccacttcgaagacgcgctgcctgccgctgcccct
gctgcgggtcacaccgccgccgccgcgtcggaaggcgaaagcgacacgaaccagatcaac
cgctatcttctcaagaaggtggacgaactggaactgtcggtccgctcggccaactgcctc
aagaacgacaacatcatctatatcggcgatctggtccagaagaccgaagccgagatgctg
cgcacccccaatttcggccgcaagtcgctgaacgaaatcaaggaagtgctgtcgtccatg
ggcctgcgcctaggcatggacatccccggctggccgccggagaatatcgaagaaatggcc
aagaagctcgaacaagagctgctgggctaa
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