Sphingobium sp. YG1: YGS_C1P2632
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Entry
YGS_C1P2632 CDS
T05858
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C1P2632
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P2632
Enzymes [BR:
spyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YGS_C1P2632
DNA replication proteins [BR:
spyg03032
]
Prokaryotic type
DNA Topoisomerases
YGS_C1P2632
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YGS_C1P2632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
BBD01377
UniProt:
A0A2Z6AHE9
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Position
1:complement(2786037..2788538)
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AA seq
833 aa
AA seq
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MSEEPVNTPNSNEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDLITITLNPDGSVSVEDNGRGIPTGIHKEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEWLDLNIWRDGKEHWMRFAYGDATAPLKIVGDAPDGKKGT
RVTFLASTEKAPGDGGTFKNQIEFDFEKLEHRYRELAFLNSGVRLFLVDARHEEKKEVEL
FYEGGIAAFVKYLDRNKSAMMPEPIAISGTRDDVTIDVALEWNDSYYENVLCFTNNIPQR
DGGTHLAAFRAALTRTLNNYAEKSGALKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQT
KDKLVSSEVRQPLESLMADKMAEWLEENPAHGKMIVQKVIDAAAAREAAKKARELTRRKG
AMDIASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRNRHNQAILPLKGKILNVERA
RFDRMLSSKEVGTLIQAMGTGIRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQ
MPQIIEGGHLYIAQPPLYKATRGRSEVYLKNEAALEQYLVDNGVESMALETGGGPRTGED
LRSLIEHARRMRAVMRYVPRRYNPAIIEALSLNGALDPELSTDSQAQRLAATVAWMGAQD
AEGRWTGSVAEEGGFHFQRLWRGVTDHHVIEAGFVGSAEARKLHSIAAEDAGSYLTPSRL
ITVKALAAEANDDDLPAAPTKGAMVTRPSELLDAILTAGRKGLAIQRYKGLGEMNAEQLW
ETTLDPDNRSMLRVEVEQADVADEIFTRLMGDVVEPRREFIQDNALNVANLDV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaacccgtcaacacccccaacagcaatgaatatggcgccgacagcatcaag
gtgctcaaagggctggatgcggtccgcaagcggccgggcatgtatatcggcgataccgac
gatggcagcggcctgcaccatatggtgttcgaggtcagcgacaatgcgatcgacgaagcg
ctggcggggcattgcgacctgatcaccatcacgctgaatcccgacgggtccgtcagcgtg
gaggataatggccgcggcattccgaccggcatccacaaggaagagggcgtgtcggcggcc
gaggtcatcatgacccagctgcatgcgggcggtaagttcgaaaataccagcgacgacaat
gcctataaggtgtcgggcggcctgcatggcgtgggtgtttcggtggtcaacgcgctgtcg
gaatggctggacctcaacatctggcgcgacggcaaggaacattggatgcgcttcgcctat
ggcgatgccaccgcgccgctgaagatcgtgggcgatgcgcctgacggcaagaaggggacg
cgcgtcaccttcctcgcctcgaccgagaaggcgcccggcgacggcggcaccttcaagaac
cagatcgagtttgatttcgagaagctggaacatcgctatcgcgagctggccttcctcaac
agcggcgttcgcctgttcctggtcgatgcgcgccatgaggagaagaaggaagtcgagctg
ttctacgagggcggcatcgcggccttcgtgaaatatctcgaccgcaacaagtcggccatg
atgccggagccgatcgcgatttcgggcacccgcgacgatgtgacaatcgacgtggcgctg
gagtggaacgattcctattatgaaaatgtcctctgcttcaccaacaacatcccgcagcgc
gatggcggcacccatctggcggccttccgcgcggcgctgacccgtacgctcaacaattat
gcggaaaagtcgggtgcgctgaagaaggaaaaagtctccctcaccggtgaggatatgcgc
gagggcctgaccgccatcgtgtcggtcaagctgcccgatcccaaattcagctcgcagacc
aaggacaagctggtgtcgtccgaagtgcgccagccgctcgaaagcctgatggccgacaag
atggccgagtggctggaggagaacccggcgcacggcaagatgatcgtgcagaaggtgatc
gacgccgccgccgcccgtgaagccgccaagaaggcgcgcgaactgacccggcgcaagggc
gcgatggacatcgcatcgctgcccggcaagctggccgattgtcaggaacgcgaccccgct
aagtccgaactcttcctggtcgaaggcgattcggccggcggttcggccaagcagggccgc
aaccggcataatcaggcgatcctgccgctgaagggcaagatcctgaacgtcgagcgcgcg
cgcttcgaccggatgctctcgtccaaggaagtcggtacgctgatccaggcgatgggcacc
ggcattcgcgacgatttcaacctggaaaagctgcgctaccacaagatcgtcatcatgacc
gacgccgatgtcgacggcgcgcatatccgcacgctgctgctgaccttcttctatcggcag
atgccgcagatcatcgaaggcgggcatctctatatcgcccagccgccgctctacaaggcg
acgcgcggccggtccgaagtctatctgaagaacgaagccgcgctggagcaatatctggtc
gacaatggcgtcgaatcgatggcgctggaaaccggtggcggaccgcgtaccggcgaagat
ctgcgcagcctgatcgaacatgcccgccgcatgcgcgcagtgatgcgctatgtgccgcgc
cgctataatcccgcgatcatcgaggcgctgagcctgaacggtgcgctcgatcccgaattg
tcgacggattcgcaggcgcagcggctggccgcgaccgtcgcctggatgggcgcgcaggat
gccgaaggacgctggaccggcagcgtcgccgaagagggcggcttccacttccagcggctg
tggcgcggcgtcaccgaccatcatgtgatcgaggccggcttcgtcggatcggccgaagcg
cgcaagctgcacagcatcgcggccgaggatgccggcagctatctgacgcccagccgcctg
atcacggtcaaggcgctggcggccgaggcgaatgacgacgacttgcccgccgcaccgacc
aagggcgctatggtgacgcggccgagcgagttgctcgacgcgatcctgaccgccggacgc
aagggcctcgccatccagcgctacaaggggctgggcgaaatgaacgcggaacagctgtgg
gaaaccacgctggacccggacaatcgatcaatgctgcgggtcgaggtcgaacaggcggac
gtcgcggatgaaatcttcacgcgcctgatgggcgatgtggtagagccgcgccgcgagttc
attcaggacaatgcgctcaacgtcgccaatctggacgtttga
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