Streptococcus pyogenes HSC5 (serotype M14): L897_03810
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Entry
L897_03810 CDS
T02743
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spyh
Streptococcus pyogenes HSC5 (serotype M14)
Pathway
spyh03410
Base excision repair
spyh03430
Mismatch repair
spyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L897_03810
03430 Mismatch repair
L897_03810
03440 Homologous recombination
L897_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyh03400
]
L897_03810
DNA repair and recombination proteins [BR:
spyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L897_03810
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L897_03810
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L897_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
NOD2_WH
Glyco_transf_52
Motif
Other DBs
NCBI-ProteinID:
AGQ27535
LinkDB
All DBs
Position
731465..733675
Genome browser
AA seq
736 aa
AA seq
DB search
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHD
PYLLHDMAKAVPRIRQAIEEGERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQEQEVDVIVTDHHSLPEELPE
AFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LTGFDDQEARAIALMIKKKNEERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIV
AGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNGKRELFTAFGGHAGAAGMTLP
VDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMNHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLS
VNHWNGNTSLQFMLVDARVDGVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFK
AWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYKTIYQFPEFDLRHKLTELSHY
LNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccaaatatagctggaaaataaaagacaagaagccagatgatggcttcttt
aagctagcaaagacaaaaggtctaacccagaccgccgctcagttgatttatgagcgaggg
ataaggactgaagaagccttagatgagtttttaacagcggacttgtctcaactgcatgat
ccttacttgctacatgacatggcaaaagctgtgccaagaattcgtcaagctattgaagag
ggcgaacgaattctcatttacggcgactatgatgctgatggcatgacgtcggcttctatt
gtcaaagaaaccctagacatgatgggagcagagcctttggtttatcttcccaaccgcttt
acagatggctatggccctaaccagagcgtctataaatattttattgagcaggaagctgtg
tccctaattatcacggttgataatggcgtggccggacatgaagcgattagatatgctcaa
gaacaggaagttgatgtcattgtaactgaccatcatagcctgcctgaagaattgccagaa
gcctttgccatcattcatcctgagcatcctgatgctgattatccctttaaacacttagct
ggctgtggcgttgcctttaaattggcaacagctttgctagaaagtttaccaacagactgt
ctagacttggtagctattggaaccattgccgatatggtaagcttgacaggtgaaaaccgt
gttttagtcaaaaatggtctggccatgctcaaacacaccgaaagagtgggcttgcaggag
ttgatgtccttgtctcctattgatttggaacattttaatgaagacgccattggctttcag
attgctccgcaattaaatgctttagggcgcttagatgaccctaatccagccattgagcta
ctgacgggctttgatgaccaagaagctcgagcgattgccttgatgattaagaaaaaaaat
gaagagcgtaaggccttagtccaagacatttttgaccaagcgatggctatggttgatcct
caaaaacctgttcaagtcttggcacaagctggctggcatcctggtgttcttgggattgtc
gctggtcgtatcatggaaactattggacaaacggtcgtcgttttgaccattgataatggc
tttgcaaaaggctcggccagaagtttagaagctattaatatttttgaagccttgaatggc
aagcgtgagttatttacagcctttgggggacatgctggtgcagcaggaatgaccctgccc
gttgacaacttggaagctctttcagactttctttgtcagtttgtgatagaacgtggctta
gatcagactgccaaaaatacgttaactattgatgaaagactgtctttggacgaccttagc
cttgatattttaaagagtttagataaattagccccttatgggatgaatcatcaaaagccg
gtcttttatgtcaaggacataagggttagtcaagcgcgtaccatagggcaagaccagagc
catcttaaatttaaagtcagtcagggcaaagcttcctttgacgtactggcttttggtcaa
ggaagtcaactgcaagagttccgacaagctactggtttagaattagcagttaccttatct
gtcaaccattggaatgggaacacgagtctccaattcatgttagtagatgctcgtgttgac
ggagtgcaacttcttgacttaaggacaaaaacagccaaagttcctgaaggtattccgact
attgaagaagacccaaatgccagagtcattctgattaatgacatccctgaagatttcaaa
gcctggcgcaaccagtttgttcacaaggattttgacgccatctattttaaaaatcagatg
aaacatccttattatttaacaggatttggcagcagagagcagtttgccaagctctacaaa
accatctatcagtttcctgaatttgatttacggcataaattgacagagttgagtcactat
ttaaacatagaaaaacttttactgattaagttgattcaaatttttgaagagttgtctttt
gtgacgattgacgatgggctgatgacggttaacccccaagcgcaaaaacgagagatttca
gagagccacatttaccaagacttaaaagaattggtgaaatttcaagaaatcatggctttg
gctagcccgaaagagatgtatgattatttggtgaaatcaaacgatcaataa
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