KEGG   Sphingosinithalassobacter tenebrarum: G5C33_05520
Entry
G5C33_05520       CDS       T06464                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
spzr  Sphingosinithalassobacter tenebrarum
Brite
KEGG Orthology (KO) [BR:spzr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spzr03016]
    G5C33_05520 (thpR)
Enzymes [BR:spzr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     G5C33_05520 (thpR)
Transfer RNA biogenesis [BR:spzr03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    G5C33_05520 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: QIG79302
UniProt: A0A6G6Y2Z7
LinkDB
Position
complement(1100856..1101398)
AA seq 180 aa
MHRLFVGFRPPPAIREALLAAHGGIPGARWQRDDQLHITLRFIGDVDMHRANDAAIALAA
IRGPAFEVAIDGVGCFESKGRPNAVWAGIRPREAITQLHQKADQALVRTGLSPEHRAYFP
HITLARMSRTAGSPDRWLADHAGLATPRFLLTEFLLFESRLGGEGATYEAVERYPLEGRG
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcatcggttattcgtcgggtttcgtccgccgcccgcgattcgggaggcgctgctggcc
gcgcatggcggcattcccggcgcgcgctggcagcgcgacgaccagctccacatcacgctg
cgcttcatcggcgacgttgacatgcatcgcgccaacgatgccgcgatcgccctcgcggcg
atccgcggaccggcattcgaagtcgcgatcgacggcgtcggctgtttcgaaagcaagggg
cgccccaacgccgtctgggccggcatccgcccgcgcgaggcgatcacgcaattgcaccag
aaagccgatcaggcgctggtgcgcaccggcctctcccccgagcaccgcgcttatttcccg
catatcaccctggcgcgcatgagccgcaccgccggttcccccgaccgctggctcgccgac
catgcagggctggcaacgccacgcttcctgctgaccgaattcctgctgttcgaaagccgc
ctcggcggcgaaggcgcgacctatgaggcggtggagcgctatccgctggaggggcggggg
tag

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