Serratia quinivorans: E4343_06940
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Entry
E4343_06940 CDS
T05941
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
squ
Serratia quinivorans
Pathway
squ03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4343_06940 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_06940 (uvrC)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4343_06940 (uvrC)
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Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QBX65935
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Position
complement(1492336..1494168)
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AA seq
610 aa
AA seq
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MSDRFDAKAFLSTVTSQPGVYRMYDATGTVIYVGKAKDLKKRLASYFRQQVGSRKTETLV
KNIAQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPLIFLSADSHPRLAVHRG
AKHAKGEYFGPFPNSYAVRETLALLQKLFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA
GLVSEDEYRQQVDYVRLFLSGKDQQVLHQLIERMETASKALNFEEAARIRDQIQAVRRVT
ERQFVSGNSDDLDVIGVAFEAGMACLHVLFIRQGKVLGSRSYFPKVPGGTEMSEVVQTFV
GQFYLQGSQMRTLPAEILLDFTLPEKELLAESLSELAGRKIQIQSKPRGDRARYLKLART
NAATALTTKLSQQSTIHQRLAELTKVLNLSEINRMECFDISHTMGEQTVASCVVFDANGP
LRSEYRRYNITGITPGDDYAAMAQVLKRRYGKALEEKKIPDVIFIDGGKGQLGMAIDVFN
SLNVSWDKNKPLLIGIAKGADRKAGLETLFFVPEGEGIALPSDSPALHVIQHIRDDSHNH
AITGHRQRRAKVRNTSALELIDGVGPKRRQVLLKYMGGLQPLLNASVEEIAKVPGISQAL
AEKIYNALKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaccgttttgatgccaaagcatttctaagcactgtaaccagccagcctggcgtc
taccgaatgtacgacgctactggcacggttatctacgtcggtaaagccaaggatctgaaa
aaacgcctcgccagttacttccgccagcaggtgggaagccgtaaaactgagacgctggtt
aaaaatatcgcgcaaatagacgttactgttacgcacaccgaaacagaagcgctattactg
gaacataactacataaagttataccagccgcgatataatgttcttttgcgagacgataaa
tcttatccgctgatcttcctcagtgcggacagtcacccgcggctggccgtgcatcgtggt
gccaaacatgccaagggggaatacttcggtccattcccaaattcctatgccgtgcgtgag
acgctggcgctgctgcagaaactgttcccgatacgtcagtgcgagaacagcgtataccgc
aaccgctcgcgcccttgtttgcagtaccagatcggccgttgcctggggccttgtgtcgcc
gggctggtgagtgaagacgaatatcgtcagcaggtggactatgtgcgcctgttcctgtct
ggtaaggatcaacaggtactgcatcagttgatcgaaaggatggaaaccgccagcaaggct
ttgaacttcgaagaggcagcgcggatacgcgatcagatccaggcggtgcgcagggtgact
gagcgtcagttcgtgtccggtaacagcgacgatctggatgtgatcggcgtggcattcgag
gccggcatggcctgtctgcacgtcctgtttatccgccagggcaaagtgttgggtagccgc
agctacttccccaaagtgccaggcggcaccgaaatgagcgaagtggtgcagacgtttgtc
ggtcagttctatttacagggtagccagatgcgaaccttgccggcggaaatcctgttggat
ttcactttgccggaaaaagagctgctggcagagtccctgtctgagctggccggtcgcaaa
atccagatccagagtaaaccgcgaggcgaccgtgcacgctaccttaaactggcgcgtacc
aatgcggcgaccgctctgaccaccaagctttcccagcagtcgaccattcatcagcgactg
gccgaattaaccaaggtgctgaatctttccgagattaaccgcatggaatgcttcgacatc
agccataccatgggcgagcaaaccgtcgcttcctgcgtggtgtttgacgctaatgggccg
ctgcgttccgagtatcggcgctataatatcaccggcattacgccaggggatgactatgcg
gcgatggcgcaagtgttgaaacgccgctatggtaaggctctggaagagaaaaaaatcccc
gacgttatctttattgatggcggtaaggggcagcttggtatggcgattgacgtgtttaac
tctctgaatgtgagctgggataaaaacaagcccttgctgatcggtatcgccaaaggtgct
gaccgtaaagccgggttggaaacactgttctttgttcctgaaggtgaggggattgcttta
ccgtcggattcaccggcgctgcatgtgatccagcacatccgcgatgattcgcataaccac
gcgatcaccgggcatcggcagagaagggcaaaagtaagaaataccagcgcgttggaactg
atcgacggcgttgggccaaaacggcgacaggtgctgttgaagtatatgggtggacttcaa
ccattattgaacgccagcgttgaggaaattgcaaaagtgccgggtatttcacaagcattg
gcagaaaagatctacaatgcattgaaacactga
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