Serratia quinivorans: E4343_22755
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Entry
E4343_22755 CDS
T05941
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
squ
Serratia quinivorans
Pathway
squ03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E4343_22755 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_22755 (xseA)
Enzymes [BR:
squ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E4343_22755 (xseA)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E4343_22755 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBX68815
LinkDB
All DBs
Position
complement(4837023..4838399)
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AA seq
458 aa
AA seq
DB search
MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQR
LSAEGLFDQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIIIYPTSVQGAE
APLQIVRAIETANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRIN
HRLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSERAQQRLAQMQPQARIHRY
QQRVQQQEYRLQQALERRLNAWRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTT
KQAQVGELLKTRLQDGWVESEVKTITLAKKPRKKRAAE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtttcgccgtctatttttaccgtaagccgcctgaatcagacggttcga
cagctgctggaaatggaaatgggccagatttggctctccgcagagatttccaacttctct
caaccctcttccggccactggtatttcacgctgaaagacgatcgtgcgcaggtgcgttgc
gcaatgttccgcaacactaaccgccgcaccactttccgtccgcagaatggccaacaggtc
ctggttcgcgccagcattacgctgtatgaaccgcgcggcgactaccaactgattgccgaa
agcatgcagcctgccggtgacggtctgttgcaacagcagttcgaccagttgaaacagcgc
ctgagcgccgaaggcctgttcgaccaacagttcaagcaacccttgcccagcccggccaaa
cgcgtcggggtcattacctccgccagcggtgcggcgctgcacgatgtgctgcaggtgctg
caacggcgtgatccttcactgcctatcattatttaccctacttcggtacagggcgcagaa
gcgccattgcagattgtgcgtgccatcgaaacggctaaccgccgcgacgagtgtgacgtg
ctgatcgtcggccgtggtggcggttcgctggaagatctgtggagttttaatgacgaacgc
gtggcgcgggcaattttcgccagccgcattccgatcgtcagcgccgtcggccatgaaacc
gacgtcaccattgccgattttgtcgctgatttgcgtgcgccaaccccttcagccgccgcc
gaactggtcagccgcaatcagctggagctgctgcgccagttgcagtcccagcagcagcgg
atggaaatggcgatggattactacctggcacagcgccagcaacagttcacccgcatcaac
caccgtttgcagcaacagcatccacacctgcgcctggcgcgtcagcagacgctgttgttc
aaactgcagcgtcggttggaagatggcatgcagaaccaactgcgcttgtcttcacgccgc
agcgagcgggcgcaacagcgcttggcgcagatgcagccacaggcacgcattcatcgctat
cagcaacgcgtgcagcagcaggaataccgtttacagcaggcgctggagcggcggcttaac
gcctggcgtcaacgctttggtgtggcctgcagccagcttgaggcggtcagcccgctggca
acgctggcgcgtggctacagcgtgacgcaaacgccacgcggcgaactgctgaaaaccacc
aaacaggcacaggtgggtgaattgctgaaaacccgtctgcaggatggctgggtggaaagc
gaggtgaaaaccattaccctggccaaaaagccgcgcaaaaagcgcgcggctgaataa
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