Salpingoeca rosetta: PTSG_05742
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Entry
PTSG_05742 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_05742
Enzymes [BR:
sre01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PTSG_05742
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PTSG_05742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Miga
Motif
Other DBs
NCBI-GeneID:
16074187
NCBI-ProteinID:
XP_004993611
UniProt:
F2UB36
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MMEEDNTQGADQAPKQQQQRAAADGSRKRRRRPPKKNPNAPTVRPSVLVHPGDCGPREAL
RQPKRKSGNNKKYLKVLPTGMKTVTAATWRSNNNLPSLPDGVEEPSPYYTYEGVFDGHGV
KVHRVPDMYWLHYQGCFGKANLSKSEPMHHKVVRDVAAGVVELLTVAERRVDRKQRRVER
NERRKQVRAKKREEQQAKKREEKAMRRRERKEAHKQQAHGGNGGNGDDVDGDGGDAESRR
ASVEERDKEDGVENDEAEGGDQGEGAEGGREAATTTSTDKAGDDGDGDDDDGGEQDTAAP
AEEERQDEQQGMEEAEEQQQQQVGGGGTAQPTTTTMSAATAAERDHDDDGNLPSKRAKQP
QQQDRTRDGGNDGGDEQPQHQQPQQQQQESSMQWVEVSGDNIPPELRGRQIIHATREVLQ
LSLVEAFFLKHGLGCLRILDEAGRDMSTVECWRAFTRVQPQFVQRYVVYHHLRSAGWVPK
SGLKFAADFLAYRQGPAYYHSRGMDVYSG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggacaacacccaaggtgccgatcaggcaccaaagcagcagcagcaacgc
gcagcggcagatgggagccgtaagcgccgtcgcaggccgccaaagaagaaccccaacgca
ccgacagtgcggccatctgtgctcgtgcacccgggcgactgcggtcctcgagaggctcta
cgacagccgaaacggaagtctggcaacaacaagaagtatctgaaggtgctgccgactggc
atgaagacggttacggcggcaacttggcgctccaacaacaaccttccttccctgccagat
ggcgtcgaggagcccagcccatactacacatatgagggcgtgttcgatgggcacggtgtc
aaggtgcaccgagtgccggacatgtactggctacactatcagggctgctttggtaaggcc
aacctgtccaagagcgaacccatgcaccacaaggttgtgcgtgacgttgctgccggcgtc
gtcgaactcttgacggtggctgagcggcgcgtggaccgtaagcaacggcgggtggagcga
aacgagcggaggaaacaggtgcgggcgaagaagagagaggagcagcaggcaaagaagagg
gaagagaaggcaatgaggaggagggagaggaaggaggcccacaagcagcaggcccatggt
ggcaatggcggtaatggtgatgatgttgatggtgatggtggtgatgctgaaagccgacgt
gcctctgttgaagagcgggacaaggaagacggggtggagaacgacgaagcagaagggggt
gaccagggcgaaggtgccgagggaggcagggaagcagccactacaacaagcacagacaag
gccggcgacgatggtgatggcgatgacgatgacggaggagagcaggatacggcagcaccg
gccgaagaagagagacaagatgaacaacagggcatggaggaggcggaggagcagcaacaa
cagcaagtgggtggtggtggcacggcacagcccacgaccacgacgatgagcgccgccact
gctgccgaacgtgatcatgacgatgacggcaacctcccgtccaagcgggcgaagcaaccg
caacagcaagatcgtacgcgtgacggtggcaatgatggtggtgatgagcagccacagcac
caacagccacaacagcagcagcaggagtcgtcgatgcagtgggtggaggtgtccggggac
aacattccccccgaactgcgcggccggcaaatcattcacgcaacacgcgaggtcttacag
ctcagtcttgtcgaggcatttttcttgaagcacggccttgggtgccttcgtattctcgac
gaagcagggcgagacatgtccacggtcgagtgctggcgtgcattcacgcgtgtgcagccg
cagtttgtgcagcgctacgttgtttaccaccatcttcgcagcgccggctgggtgccaaag
tcaggtttgaagttcgcggcagactttcttgcataccgccaagggccagcatactaccac
tcaaggggaatggatgtttattcaggataa
DBGET
integrated database retrieval system
