KEGG   Salpingoeca rosetta: PTSG_10006
Entry
PTSG_10006        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K12641  lamin A/C
Organism
sre  Salpingoeca rosetta
Pathway
sre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    PTSG_10006
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sre04812]
    PTSG_10006
Cytoskeleton proteins [BR:sre04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type V: Nuclear lamins
     PTSG_10006
SSDB
Motif
Pfam: Filament LTD CENP-F_leu_zip HMMR_N Crescentin Lzipper-MIP1 DUF1664 CALCOCO1 SlyX FlxA Phage_GP20 DUF2203 ADIP DUF5738 ATG16 CCDC144C PspA_IM30 DUF4407 BLOC1_2 Tup_N Herpes_UL6 Laminin_II TPR_MLP1_2
Other DBs
NCBI-GeneID: 16069465
NCBI-ProteinID: XP_004988923
UniProt: F2UP87
LinkDB
Position
Unknown
AA seq 556 aa
MADTASTPGSPQFRRRVKEREQLDELNNELAAYLVRVRELQKENGELTSQLEAIRFSRKR
FESTATIKLEGQVNDLLEEIRRKTTEIGTLNHQVQDLRKQLNKTEGDALEATREKDDLAK
QLNEALSKVQELEGQVSGLQRDVSQRDTTVTNLQRRVASLEADLGRQVDDTKRERLARLE
AESRAQGLEDKLSSQDDMYQQQVTALEEQIKIGGTSGGLSEEDLEAALTEAKEHYKQAVN
NFRTQMRSYFAQQPIIEPDTRGLEERARLQTEVIEWRSKYEDVKAQGATAQTEIEGLKSK
LAGLEDVFAQIKKSHTDEIRHKEDFIFKLTKTMQDKDDLYRDLLDERIALDAEIDRYRRQ
LESALRMFEARSPGTGAPQMVASVRKTTRELVALSGRRAVSTKRRTAAQADGGDGGADGE
LGDGSPKAKMSRLAEEAHSFTVETNTQGALSVEDVDYREGQYILLKNTTASPLDLADWAV
TVTNRDTQLGTFEFPAVTLAPGRSTRVIRGAGDGAEKLEGDVVWTEFPDLAAQPELAVYA
FDPDDNESSTWAIMRD
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggccgacaccgcgtccacgccgggctccccccagttccgccgccgcgtcaaggagcgc
gagcagctcgatgagctcaacaacgagctcgctgcgtacctcgtgcgtgtgcgcgagctg
cagaaggagaatggcgagctgacctcgcagctcgaggcgattcgcttctctcgcaagcgc
tttgagtcgacggccaccatcaagctggagggccaggtcaacgacctcctggaggaaatc
cgccgcaaaaccaccgagattggcaccctgaaccaccaggtgcaggatctccgcaagcag
ctgaacaagacggagggcgatgctctggaggcaacccgcgagaaggacgacctcgcaaag
cagctcaacgaagcgctgtcgaaggtgcaggagcttgaaggccaggtctctggtctgcag
cgggatgtgtcgcagcgggacacgaccgtgaccaacctccagcgccgcgtggcctccctc
gaggcagacctcggccgccaagtcgacgacacgaagcgggagcggcttgcgcggctggag
gcggagtcgcgtgcccagggccttgaggacaagctgtcgagccaggacgacatgtaccag
cagcaggtgacggcgcttgaggagcagattaagattggcggcacgtctggcgggctgagc
gaggaggacctcgaggcagccctcaccgaggcaaaggagcactacaagcaggccgtcaac
aacttccgcacacagatgcgctcatactttgcacagcagccgattattgagcccgacacg
cgcgggctcgaggagcgagcgcgtctgcagacggaggtgattgagtggcgctcaaagtac
gaggacgtcaaggcccagggcgcaaccgcacagaccgagattgagggtctgaagagcaag
ctcgctggcctggaggacgtgtttgcccagattaagaagtcccacaccgacgaaatccgc
cacaaggaggactttatcttcaagctgacaaagacgatgcaggacaaggacgacctctac
cgcgacctcctcgacgagcgcattgcgcttgacgccgagattgaccgctatcgccggcag
cttgagagtgcgctgcgcatgtttgaggcgcgcagccccggcacgggcgccccgcagatg
gtcgcctctgtgcgcaagaccacacgcgagctcgttgccctgtctggccgccgcgccgtc
tccaccaagcgccgcaccgctgcacaggccgatggcggtgatggcggtgctgatggtgag
ctgggcgacggcagcccaaaggccaagatgagccgcctggcagaggaggcacacagcttc
accgtcgagaccaacacgcagggtgcgctgtccgttgaggatgtggactaccgcgagggc
cagtacattctcctgaagaacaccaccgccagccccctcgacctcgcagactgggccgtc
accgtcacaaaccgcgacacacagctcggcacctttgagttcccggctgtgacgcttgct
cccggccgctcgacccgcgtgatccgcggtgcgggcgacggcgcggagaagcttgagggc
gacgtggtgtggactgagttcccggacctcgctgcccagcccgagctcgccgtgtacgcc
tttgacccagacgacaacgagtccagcacctgggccatcatgcgcgactga

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