KEGG   Stenotrophomonas rhizophila: BAY15_1600Help
Entry
BAY15_1600        CDS       T04500                                 

Definition
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase / fumarate reductase, flavoprotein subunit [EC:1.3.5.1 1.3.5.4]
Organism
srh  Stenotrophomonas rhizophila
Pathway
srh00020  Citrate cycle (TCA cycle)
srh00190  Oxidative phosphorylation
srh00650  Butanoate metabolism
srh01100  Metabolic pathways
srh01110  Biosynthesis of secondary metabolites
srh01120  Microbial metabolism in diverse environments
srh01130  Biosynthesis of antibiotics
srh01200  Carbon metabolism
Module
srh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
srh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srh_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:srh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    BAY15_1600
   00650 Butanoate metabolism
    BAY15_1600
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    BAY15_1600
Enzymes [BR:srh01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     BAY15_1600
    1.3.5.4  fumarate reductase (quinol)
     BAY15_1600
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA FAD_binding_3
Motif
Other DBs
NCBI-ProteinID: AOA72034
UniProt: A0A1B2N399
LinkDB All DBs
Position
1804177..1805967
Genome map
AA seq 596 aa AA seqDB search
MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEDGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMADGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDDKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVRKVGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCADTIKPGQPHKTLASDACDKALGLLDKLRYANGDTPTSVIRDRMQRTMQNDAAVFRTS
KTLEEGCAKMSEIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVNVDDNGKCSFDYRPVHMYTLSKDVDVVPPKPRVY
NT seq 1791 nt NT seq  +upstreamnt  +downstreamnt
atgtccgcttacaagattacggaacacaaatacgacatggtcgtggtgggcgccggcggc
gccggcctgcgtgccacgttcggcctggccgccaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttcgcacaccgtggccgcgcagggcggtatttccgccgcgctg
ggcaacatgggtgaagacgactggcgttaccacttcttcgacaccatcaaggggtcggat
tggctgggcgaccaggacgcgatcgaatacatgtgccgcgaagcgattccggccatcatc
gaactggaacactacggtgtgccgttcagccgtaccgaagacggcaagatctaccagcgc
ccgttcggcggcatgaccaccaagtacggcgaaggtccgtccgcgcagcgcacctgcgcc
gccgccgaccgtaccggccacgccatgctgcacacgctgtaccagcagtcgctggcgcac
aacgcgcgcttcatgatcgagtacttcgcgctcgacctgatcttcgatgaggaaggcgtc
tgccgcggcgtgctcgcgctggacatggccgacggctcgctgcacctgttccgcgcccac
ggcgtggtgctggccaccggcggctacggccgtgcctacttcagcgccacctcggcccac
acctgcaccggcgacggcggcggtctggtcatgcgtgccggcctgccgatgcaggacatg
gagttcgtgcagttccaccccaccggcatctacggtgcgggctgcctgatcaccgaaggc
gtgcgcggcgaaggcggcatcctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggacctggcctcgcgcgacgtggtgtcgcgttcgatgaccatcgaa
atccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgacaagctgccgggcattgccgaaagcgcgcggatcttt
gccggcgtggacgtgcacaagcagccgatcccggtcatcccgaccgtgcactacaacatg
ggtggcatcccgaccaactaccacggtgaagtggtgcgcaaggtcggcgacaaccccgat
gccgtggtgccgggcctgtacgccatcggcgaagcagcctgcgtgtctgtgcacggcgcc
aaccgcctgggctccaactcgctgctcgacctggtcgtgttcggtcgtgcggtggccaac
cgctgcgccgacaccatcaagccgggccagccgcacaagacgctggcgtcggatgcgtgc
gacaaggcgctgggcctgctggacaagctgcgttacgccaacggcgacaccccgacctcg
gtcatccgcgaccgcatgcagcgcaccatgcagaacgacgcggcggtgttccgtaccagc
aagacgctggaagagggctgcgccaagatgtcggagatcttcgactccttccaggacgtc
aaggtgtcggaccgttcgctggtgtggaactcggacctgatcgaaacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgt
ggcgcacacgcgcacgaggacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtcaatgtcgacgacaacggcaagtgcagcttcgattaccgcccggtgcacatgtac
acgctgagcaaggacgtggacgtggtcccgcccaagccgcgcgtctactaa

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