Stenotrophomonas rhizophila: BAY15_3408
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Entry
BAY15_3408 CDS
T04500
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAY15_3408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_3408
Enzymes [BR:
srh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BAY15_3408
DNA repair and recombination proteins [BR:
srh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAY15_3408
Prokaryotic type
BAY15_3408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOA73840
UniProt:
A0A1B2N8F1
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All DBs
Position
complement(3904014..3904718)
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AA seq
234 aa
AA seq
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MNDDVHPTIQLEPSWKARIGDYLLRPEMRDLAAFLRQRKAAGAHVFPPGPQIFAAFDATP
FDQVKVVILGQDPYHGAGQAHGLSFSVMPGVPVPPSLLNMYKELEADLGLPRPDHGCLLP
WARRGVLLLNAVLTVEEGQAGSHQKRGWEGFTDHVVDTLNREREGLVFLLWGSYAQQKGK
VIDTGRHRVLKAPHPSPLSAHRGFLGCRHFSSANQYLERRGLGGIDWSLPPMSV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacgtacacccgaccatccagcttgaaccgagctggaaggcgcgtattggc
gattacctgctgcgccccgagatgcgcgacctggcggccttcctgcgccagcgcaaggcg
gccggcgcgcacgtgttcccgccaggcccacagatctttgccgcgttcgacgccaccccg
ttcgaccaggtcaaggtagtcatcctgggccaggatccgtaccacggtgcgggccaggcc
cacggcctgagcttctcggtgatgcccggcgtgccggtgccgccgtcgctgttgaacatg
tacaaggaactggaagccgacctcggcctgccacgcccggaccatggctgcctgctgccg
tgggcccgccgtggcgtgctgctgctcaacgcggtgctgaccgtcgaagaggggcaggcc
ggctcccaccagaaacgcggctgggaaggcttcaccgaccacgtcgtggacaccctcaac
cgcgagcgcgagggcctggtgttcctgctgtggggcagctacgcccagcagaagggcaag
gtgatcgataccggccgccaccgcgtgctcaaggcaccgcatccgtcgccgttgtcggcg
catcgcggtttcctgggatgccgacacttctcgtcggccaaccagtacctggagcgacgc
ggcctgggcggcatcgactggtcgttgccgccgatgtcggtgtaa
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