KEGG   Stenotrophomonas rhizophila: BAY15_3408
Entry
BAY15_3408        CDS       T04500                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
srh  Stenotrophomonas rhizophila
Pathway
srh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BAY15_3408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srh03400]
    BAY15_3408
Enzymes [BR:srh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BAY15_3408
DNA repair and recombination proteins [BR:srh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BAY15_3408
 Prokaryotic type
     BAY15_3408
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AOA73840
UniProt: A0A1B2N8F1
LinkDB
Position
complement(3904014..3904718)
AA seq 234 aa
MNDDVHPTIQLEPSWKARIGDYLLRPEMRDLAAFLRQRKAAGAHVFPPGPQIFAAFDATP
FDQVKVVILGQDPYHGAGQAHGLSFSVMPGVPVPPSLLNMYKELEADLGLPRPDHGCLLP
WARRGVLLLNAVLTVEEGQAGSHQKRGWEGFTDHVVDTLNREREGLVFLLWGSYAQQKGK
VIDTGRHRVLKAPHPSPLSAHRGFLGCRHFSSANQYLERRGLGGIDWSLPPMSV
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaacgacgacgtacacccgaccatccagcttgaaccgagctggaaggcgcgtattggc
gattacctgctgcgccccgagatgcgcgacctggcggccttcctgcgccagcgcaaggcg
gccggcgcgcacgtgttcccgccaggcccacagatctttgccgcgttcgacgccaccccg
ttcgaccaggtcaaggtagtcatcctgggccaggatccgtaccacggtgcgggccaggcc
cacggcctgagcttctcggtgatgcccggcgtgccggtgccgccgtcgctgttgaacatg
tacaaggaactggaagccgacctcggcctgccacgcccggaccatggctgcctgctgccg
tgggcccgccgtggcgtgctgctgctcaacgcggtgctgaccgtcgaagaggggcaggcc
ggctcccaccagaaacgcggctgggaaggcttcaccgaccacgtcgtggacaccctcaac
cgcgagcgcgagggcctggtgttcctgctgtggggcagctacgcccagcagaagggcaag
gtgatcgataccggccgccaccgcgtgctcaaggcaccgcatccgtcgccgttgtcggcg
catcgcggtttcctgggatgccgacacttctcgtcggccaaccagtacctggagcgacgc
ggcctgggcggcatcgactggtcgttgccgccgatgtcggtgtaa

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