Selenomonas ruminantium subsp. lactilytica: SELR_24110
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Entry
SELR_24110 CDS
T01799
Name
(GenBank) putative ThiF family protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sri03016
]
SELR_24110
Transfer RNA biogenesis [BR:
sri03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SELR_24110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
UDPG_MGDP_dh_N
NAD_binding_7
Cons_hypoth95
Sacchrp_dh_NADP
ApbA
3HCDH_N
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BAL84119
UniProt:
I0GTN2
LinkDB
All DBs
Position
complement(2529948..2530694)
Genome browser
AA seq
248 aa
AA seq
DB search
MSIHRFSRTELLLGQQGLKHLAAATVAVFGVGGVGSFTVEALARAGVGHLVLVDNDEISL
TNINRQLHSLSSTVGRMKTEVMRERILDINPAAQVTVINDFYLPDNADRFFITSYDYVVD
AIDTVAGKVSLAVECQKRHIPVMASMGAGNKLDPARFEITDIYKTSVDPLARVMRKKLKE
QGVRKLKVVYSTEQPRQVILPADGVAEKKGSAGRTAPGSISFTPSVAGLLIASEVVKDLT
GNFGEAEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatacatagattttcccgcacggaattgttgctggggcagcagggcttgaaacac
ctggcagctgcaacggtagcggtgttcggtgtaggaggcgtaggttcctttaccgtggag
gcactggcacgagccggtgtcggccatctggtattggtggacaatgatgagatcagtctg
accaatatcaaccggcagctccattctttgagctccacagtgggacgaatgaagaccgag
gtaatgcgggagcgcattctggatatcaatcctgcggcgcaggtaaccgtaatcaatgat
ttttatctgccggataatgccgacagattttttattaccagctacgattatgtggtggat
gccatcgatacagtggcggggaaggtcagcctggcagtggaatgccaaaaacgacatatt
cccgtcatggccagtatgggggccggcaataagctggatcctgcccggttcgaaattacg
gatatctataagacaagtgtggatcctttggcccgggttatgcgcaagaagttgaaagaa
cagggcgtaaggaagctgaaggtggtgtattccaccgagcagccgcggcaggtgattttg
ccggctgatggtgtggcagagaagaaaggtagtgccggtcgcacggcaccgggcagcatt
tccttcacaccttcggtggcggggctgcttatcgccagtgaagtggtgaaggatctgact
ggtaatttcggggaggcagagaaatga
DBGET
integrated database retrieval system
