Streptomyces rimosus: CP984_19685
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Entry
CP984_19685 CDS
T07052
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
srim
Streptomyces rimosus
Pathway
srim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP984_19685 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_19685 (recF)
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CP984_19685 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_33
SbcC_Walker_B
ABC_tran
AAA
Motif
Other DBs
NCBI-ProteinID:
QEV76937
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Position
4636234..4637370
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AA seq
378 aa
AA seq
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MHVSHLSLADFRSYARVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAPL
VRMGAERAIVRAAVVQGERQQLVELELNPGKANRARINRSSQVRPRDVLGIVRTVLFAPE
DLALVKGDPGERRRFLDELITARSPRMAGVRSDYDRVLKQRNTLLKSAALARRHGGRQMD
LSTLDVWDQHLARVGAELLAQRLDLIATLQPLADKSYEQLAPGGGPLSMEYRGSAGEGLG
GVSTREELYGLLIEALGAARKNEIERGVTLVGPHRDDLLLKLGQLPAKGYASHGESWSYA
LALRLASYDLLRGEGNEPVLVLDDVFAELDSRRRERLAELVAPGEQVLVTAAVDDDVPGV
LSGARFAVSEGVAEKVTP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtatcgcatctctcgctggccgacttccgctcgtacgcccgggtcgaggtcccg
ctcgacccgggcgtcaccgcgttcgtgggccccaacgggcaggggaagaccaacctcgtc
gaggcggtgggctatctggccaccctcggcagccaccgggtctcctcggacgccccgctg
gtgcggatgggcgccgagcgggccatcgtgcgggccgcggtcgtccagggcgagcggcag
cagctggtggagctggagctgaaccccggcaaggccaaccgggcccgtatcaatagatcg
tcgcaggtcagaccgcgtgacgtgctggggatcgtgcggacggtgctgttcgcgccggag
gacctggcgctggtcaagggcgatccgggggagcgccgccgcttcctggacgagctgatc
accgcccggtcgccgcggatggcgggcgtgcgctcggactacgaccgggtgctcaagcag
cgcaacacgcttttgaagagtgcggcgctggcacgtcggcacggcggccgtcagatggat
ctgtcgaccttggacgtatgggatcagcatctggcgcgggtcggcgcggagctgctcgcc
cagcgactggatctgatcgccacgctccagccgctggccgacaagtcgtatgagcaactg
gcgccgggcggcggcccgctgtcgatggagtaccgcggctcggcgggcgagggcctgggc
ggtgtctcgacgcgtgaggagctgtacgggctgctgatcgaggcgctcggcgcggcccgt
aagaacgagatcgagcgcggggtgaccctggtcggtccgcaccgcgacgacctgctgctc
aagctgggccagctgcccgccaaggggtacgcgagccacggcgagtcctggtcgtacgcg
ctcgcgctgcgcctggcctcgtacgacctgctgcgcggtgagggcaacgagccggtgctg
gtgctcgacgacgtgttcgcggagctggacagccggcggcgggagcggctggcggagctg
gtggcgcccggcgagcaggtgctggtgaccgcggcggtggacgacgatgtgccgggcgtg
ctgtccggggcccggttcgcggtgtcggagggcgtggcggagaaggtcacgccgtga
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