Streptomyces rochei: SRO_1187
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Entry
SRO_1187 CDS
T06265
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srj03009
]
SRO_1187
Ribosome biogenesis [BR:
srj03009
]
Prokaryotic type
ribosomal protein modification factors
SRO_1187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
BBC92363
LinkDB
All DBs
Position
complement(1318969..1320900)
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AA seq
643 aa
AA seq
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MPTETVTAPHPAPPTATGPWDAVCAALTAALAERPGTPPVTVTPLGVRDELAVDAYEFTR
DAVPVGLYGHHALVGPVPAEGAPGCPRCLARRWQAVRAGYLRDALERGTEPRATGTPPWL
AGFTVDALAALVAAVSRGDRGGRHPWVWLLDLETLRVCRVALVPDGECPSCGTRPDDTAE
GARITLDPGTKHDPADFRARPLAAYDLVPEAFVNPVTGALGPSFAPDLASASTSSVIGAF
TTRSGDYLRECYWGGHTDSYGTSVRVGVLEGLERFAGMRGRAKRTVLNASLDDLGDLAVD
PRVTGLYSDAFHATAPEVPRFAPDRPVDWVWGWSLRDARPVLVPEVVAYYHAPGGIRRRF
VQESSNGCASGGSLTEAVYHGLMETVERDAFLLAWFGRLRLPEIDPASSTRTATRAMVDR
LAMYGYRARFFDTRVTFPVPVVTAVAERVDGGPGLLCFGAGASLDPEAALAGGLCEIATD
SVNLRRRTARDESRLRRLAGDFDQVQVLHDHPLLYGLPEMGRYTDFLLRGRDDAERVPLA
SLATGRGALSPAADLRTDVEACVGAVTAHGFDVVVVDQTSPEQRELGLHTVKVLVPGLLP
IDFGTSRQRAPLMPRMRTALREAGLRDDDLTSADLNPAPHPFP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactgagaccgtgaccgcgccgcaccccgccccgcccacggccaccgggccgtgg
gacgcggtgtgcgccgcgctcaccgccgccctcgcggagcgcccgggcaccccgccggtg
accgtgaccccgctcggcgtccgcgacgaactcgccgtcgacgcctatgagttcacgcgg
gacgcggtaccggtcggcctgtacggacaccacgccctggtcggtcccgtaccggccgag
ggcgcgcccggctgcccccggtgcctcgcgcgccgctggcaggcggtgcgtgccggatat
ctgcgggacgcgctggaacgcggcaccgaaccccgggccaccggcaccccgccctggctg
gccggcttcacggtggacgccctcgccgcgctggtcgcggcggtgtcccgcggggaccgg
ggcggccggcacccctgggtgtggctgctggacctggagaccctgcgcgtgtgccgggtc
gcgctggtgcccgacggcgaatgcccgtcctgcgggacccggccggacgacaccgccgag
ggcgccaggatcaccctggaccccggcaccaagcacgacccggccgacttccgcgcccgc
ccgctcgccgcgtacgacctggtgccggaggcgttcgtcaaccccgtcaccggcgccctc
ggcccctccttcgcacccgacctggcctccgcctcgacctcctcggtgatcggcgccttc
accacccgctcgggcgactatctgcgggagtgctactggggcggccacaccgactcctac
ggcaccagtgtgcgcgtcggggtactggagggcctggagcggttcgccgggatgcggggc
cgcgccaaacggacggtgctcaacgcgagcctcgacgacctcggggacctcgccgtcgac
ccacgcgtcaccggcctgtactccgacgccttccacgccaccgcacccgaggtgccgcgg
ttcgcgccggaccgcccggtggactgggtgtggggctggtcgctgcgcgacgcccggccg
gttctcgtgcccgaggtcgtggcctattaccacgcgcccggcgggatccggcggcgcttc
gtccaggagagctccaacggctgtgcctccggcggcagtctgaccgaggccgtctaccac
gggctgatggagaccgtggaacgcgacgccttcctgctggcctggttcggccggctccgg
ctgcccgagatcgacccggcgagcagcacccggaccgcgacccgcgccatggtcgaccgg
ctggcgatgtacggctaccgggcccggttcttcgacacccgcgtcaccttcccggtgccg
gtggtgaccgccgtcgccgaacgcgtcgacggcgggcccggactgctctgcttcggcgcg
ggcgcctccctcgaccccgaggccgcgctcgccgggggactgtgcgagatcgccaccgac
tcggtcaacctgcgccgccgcaccgcccgcgacgaatcccggctgcggcgcctggcgggc
gacttcgaccaggtccaggtgttgcacgaccaccccctgctgtacgggctgcccgagatg
ggccggtacaccgacttcctgctgcgcggccgcgacgacgccgaacgggtgccgctcgcc
tccctcgccaccgggcggggtgccctgtcgcccgccgccgatctgcgtaccgatgtggag
gcgtgcgtcggcgccgtcaccgcgcacggcttcgatgtcgtcgtggtcgaccagacctct
ccggaacagcgggagttgggcctgcacaccgtgaaggtcctggtgcccggcctgctcccg
atcgacttcggcacaagccgccaacgcgccccgctgatgccccggatgcgaacagcgctg
cgcgaagccggcctacgggacgacgacttgacgtccgccgatctcaacccggcgccgcat
cccttcccctga
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