Serratia plymuthica 4Rx13: SOD_c07950
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Entry
SOD_c07950 CDS
T02710
Symbol
yafV
Name
(GenBank) UpF0012 hydrolase YafV
KO
K13566
omega-amidase [EC:
3.5.1.3
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00250
Alanine, aspartate and glutamate metabolism
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SOD_c07950 (yafV)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.3 omega-amidase
SOD_c07950 (yafV)
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GFIT
Motif
Pfam:
CN_hydrolase
Motif
Other DBs
NCBI-ProteinID:
AGO53792
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Position
complement(872843..873616)
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AA seq
257 aa
AA seq
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MSTLKITLLQQPLVWRDGEANLRHFDEQLAPLTGRDLIVLPEMFTTGFAMDAGESALPEQ
QVIAWLHGWASKSNALVGGSVALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHY
RAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLALYVANWPAPRSKHWQTLLAAR
AIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQAEPGAAARLDAELSLENLQSY
RSAFPAWRDADSFLRHD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttaaaaattaccctgttgcagcaaccgctggtctggcgcgacggcgaagcc
aacctgcgccatttcgatgagcagttggcaccgctgaccggccgcgatctgatcgtgctg
ccggaaatgttcaccaccggtttcgcgatggacgccggggaaagcgcgctgccggaacaa
caggtgatcgcctggctgcacggctgggccagcaaaagcaacgctctggtcggtggcagc
gtggcgctgaaaactgccgagggcgcggtcaaccgtttcttgttggtcgaaccgaacggc
cgggtgcatgcttacgataagcgccacctgttccgcatggctggcgaacacctgcattac
cgcgccggtaaaaaacgcgagattttcgaatggcgcggctggcgcattctgccgcagatc
tgttacgacctgcgcttcccggtgtggtcccgctaccagcaggattacgatctggcgctg
tacgtcgccaactggccggcgccgcgcagtaaacattggcaaacgctgctggccgcacgc
gccattgagaatcaggtctacgtggccggctgcaaccgcgttggcgaagacggcaacggg
ctgaactacagcggcgacagcctgatcctcagcccgcaaggcgaaacgctggcacaggca
gaaccgggcgccgccgcacggttggacgccgaactgtcgctggaaaacctgcagagttac
cgcagcgctttcccggcctggcgcgatgccgacagcttcctgcggcacgattga
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