Serratia plymuthica 4Rx13: SOD_c37000
Help
Entry
SOD_c37000 CDS
T02710
Symbol
citA
Name
(GenBank) sensor histidine kinase CitA
KO
K07700
two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:
2.7.13.3
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOD_c37000 (citA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
srl01001
]
SOD_c37000 (citA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
srl02022
]
SOD_c37000 (citA)
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SOD_c37000 (citA)
Protein kinases [BR:
srl01001
]
Histidine kinases
CitB family [OT]
SOD_c37000 (citA)
Two-component system [BR:
srl02022
]
CitB family
CitA-CitB (citrate fermentation)
SOD_c37000 (citA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_2
HATPase_c
HATPase_c_5
PAS_8
PAS
HATPase_c_2
SPOB_a
PAS_7
PAS_4
dCache_3
PAS_9
sCache_3_3
CBS
Motif
Other DBs
NCBI-ProteinID:
AGO56658
LinkDB
All DBs
Position
4165797..4167422
Genome browser
AA seq
541 aa
AA seq
DB search
MRVKLSFQIKLFLCLVAFSCLLLTLIGAYTYYQLDAQLHRDLGARAQVQAREIALIPSLV
SAVEKNDPEQVAALMKKIRASSDASYIVIGDNHARHLYHSEYADRFGTPMVGGDNKEVLE
GKSIISFRKGGIGISLRSKAPILDENNHVIGIVSVGYLKSHIDNLNARTLTQIVGSIVLL
LIALFIFSWLLSKNLKRQMFWLEPKDIALLVRQQKALLEAIYEGVIAVDPQLRIITINHA
ARELLDLRQPASTLMGREIGEVIQSQPDFFGASQLGHDTHDEVCRFNHVRVIASRVRIMQ
EEVLQGWVISFRDKNDINTLSSQLSQVKRYADNLRIMRHEQLNWTATLAGLLHMQRYDEA
IRYVEAQSEGAQEILDFISQRFSSAALCGLLLGKYSSAKEKGVELRFDPACQLRQIPAAL
NETELMSIIGNLLDNAVEATLHCDAPHEAVELYISDSSNELVIEVADRGTGIAAEVRDTL
FEQGVTTKDDKGDHGIGLHLVASHVAQAHGSIEVSDNDPHGAIFSLFIPYEFQAAGNNAE
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaaaactctcatttcaaatcaagctgttcctgtgcctggtcgccttctcctgt
ctactgctgacgttgattggcgcttacacctactatcagttggatgcccagttgcaccgt
gatcttggcgcgcgggcgcaggtgcaggcgcgggagatagcgctgatcccctccctggtc
agcgccgtggaaaaaaacgaccctgagcaagtcgccgcgctgatgaagaaaatacgcgcc
agcagcgatgccagttatattgtcatcggcgacaatcacgcccggcatctttaccattcc
gaatacgccgatcgcttcggcaccccgatggtcggtggcgataataaagaagtgttggaa
gggaaaagcattatttcgttccgcaaaggcggtatcggtatttcattgcgcagcaaagcg
ccgatactggatgaaaataatcacgtcatcggcattgtttcggttggctacctgaagtca
catatcgataatttgaatgccagaaccctgacgcagatcgtcggttccattgtgctattg
ttaatcgccctgtttattttttcctggctgttatcgaaaaatttaaaacgccaaatgttc
tggcttgagcccaaagatattgcgttgctggtgcgccagcaaaaggccctgctggaagcg
atctacgaaggcgtaattgccgtcgatccccaactgcgcatcattaccatcaaccacgcg
gcgcgtgaactgctggatctgcggcaacccgccagcaccttgatgggccgtgaaatcggc
gaagtgatccagtcgcagccggacttcttcggcgcgtcgcaactggggcacgacacgcac
gatgaggtttgccgcttcaaccacgtgcgggtgatcgccagccgggtacgtattatgcag
gaggaagtgctgcaaggctgggtgatcagtttccgcgacaaaaatgacatcaataccctg
agcagccagctaagccaggtaaagcgctacgccgacaacctgcgcatcatgcgccatgaa
cagctgaactggaccgccaccctcgccgggctgctgcatatgcagcgttacgacgaggca
atccgttatgtggaggcgcagtcggaaggcgcgcaagagatcctcgactttatctcgcag
cgcttcagctcggccgcgctgtgtggcctgctgttgggcaaatactccagcgcaaaggaa
aaaggcgtcgagctgcgctttgatcccgcctgccagttgcggcagatcccggcggcgctg
aatgaaaccgaactgatgtcgatcatcggtaatttgctggataatgcggtagaggctacg
ctgcattgcgacgcgccacacgaagcggtagaactctatatcagcgacagcagcaatgag
ctggtgattgaagtggccgatcgcggtaccggcattgctgcggaggtgcgcgatacgctg
tttgaacagggcgtcaccaccaaagacgacaaaggcgaccacggcatcggcctgcatctg
gtcgccagccacgtggcgcaggcacacggcagcatagaagtgtcggacaacgatccgcac
ggcgccatattttccttgtttatcccctatgaatttcaggccgcaggcaacaacgccgag
gtttga
DBGET
integrated database retrieval system
