Serratia plymuthica 4Rx13: SOD_c38620
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Entry
SOD_c38620 CDS
T02710
Symbol
gatA
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase GatA
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00970
Aminoacyl-tRNA biosynthesis
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOD_c38620 (gatA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
srl03029
]
SOD_c38620 (gatA)
Enzymes [BR:
srl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
SOD_c38620 (gatA)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
SOD_c38620 (gatA)
Mitochondrial biogenesis [BR:
srl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SOD_c38620 (gatA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
ZapB
Motif
Other DBs
NCBI-ProteinID:
AGO56813
LinkDB
All DBs
Position
complement(4353785..4355134)
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AA seq
449 aa
AA seq
DB search
MKKLTLGQVAAGLASGELTAVQLTAAALAHIADEQGEGVRTFTRVYAQWAQQQALAADRR
RAEGKPLSALDGVPVSVKDLFDVAGEATAAGSRVLAAAPAAAKHAAVVERLLQAGAVLIG
KTNMTEFAYSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGS
VRIPAAFCGLTGFKPTARRINDGGLLPLSPSLDSIGVIAHDVAGCIALDAAITDRPLQPQ
LKNLSQARFAVPQTLVLDGLDEEVAAGFRFSLQRLAQAGAQIETIPCTEFAELAAINAAG
GFSALESWRWHQALIAEHAEEYDPRVLSRIRRGQPLGEGDLQQLQQQRADWQRRVTAAVQ
AFDALLMPTVPLVAPTVAELEMDEEAYFRINGAALRNPSVINFLDGCALSLPCQRPGGAP
VGLMLAGLPMHDEALLGWALAIERCLAGA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgactttagggcaagtcgccgccgggctggccagcggtgaattgaccgcc
gtgcaactgaccgccgccgcgctggcgcacattgccgatgagcagggcgagggagtgcgc
acctttacccgcgtttatgcgcaatgggcgcaacagcaggcactggcggccgatcgccgg
cgtgcggaggggaaacctttgtcagcgctggacggcgttccggtgtcggtcaaagacctg
ttcgacgtggccggtgaagccaccgccgccggctcacgggtgctggccgccgcaccggcc
gccgcaaaacatgccgcggtggtggaacgcttgttgcaggcgggtgcggtgcttattggt
aaaaccaacatgaccgagttcgcctattccgggcttgggatcaaccctcactacggcacg
cctgccaatccttgggatcgcgctgcacgtcgtattcccggcggttcatcctccggggct
gcggtcgcggtggccgacgggatgtgttttggttcgattggcagcgacaccggcggatcg
gtgcggatcccggcggccttctgcggcctgaccggttttaagcctaccgcccggcgaatt
aacgatggcggcctgttgccgctgtcaccttcgctggattcgatcggcgtgatcgctcac
gacgttgccggttgtatcgctctggatgcggcgataaccgatcggccgttgcagccgcag
ttaaaaaacctgagtcaggcgcgttttgcggtaccgcaaaccctggtgttggacggcctg
gatgaagaggtcgcagcagggtttcgcttcagcctgcagcggctggcgcaggccggcgcg
cagattgaaaccattccctgcacggaattcgccgaactggcggccatcaatgctgccggc
ggttttagcgcgctggagtcctggcgctggcaccaggcgctgatcgccgaacatgccgag
gaatatgacccacgtgtgctgtcgcgcattcgccgcggtcagccgctgggggagggggat
ttgcagcagctacagcagcagcgtgccgattggcaacggcgagttaccgccgccgtgcaa
gcgtttgacgcgttgctgatgccgaccgtaccgctggtcgcgccgacggttgccgagctt
gaaatggatgaagaggcctatttccgtatcaatggcgccgcgctgcgtaatccttcggtg
atcaatttcctcgacggctgcgcgctgtcgctgccttgtcagcggcccggcggagcgccg
gttggtctgatgctggctgggttacccatgcatgatgaggcgttgttgggctgggcgctg
gcgattgaacgctgtctcgccggtgcgtga
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