Serratia plymuthica 4Rx13: SOD_c43030
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Entry
SOD_c43030 CDS
T02710
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase Edd
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00030
Pentose phosphate pathway
srl01100
Metabolic pathways
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
Module
srl_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SOD_c43030 (edd)
Enzymes [BR:
srl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SOD_c43030 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD
Motif
Other DBs
NCBI-ProteinID:
AGO57252
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Position
4857309..4859123
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AA seq
604 aa
AA seq
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MLNPTLSRVTQRIIERSKESRTAYLARIEAARSQTVHRAQLACGNLAHGFAACQPDDKTA
LKNMVRSDIAIITAYNDMLSAHQPYENYPQRLKQALHAVGAVGQVAGGVPAMCDGVTQGQ
DGMELSLMSRDVIAMSSAIGLSHNMFDGALFLGICDKIVPGLVMSALSFGHLPALFVPAG
PMSSGLPNKEKVRVRQLYAEGKADRLALLEAEAASYHGIGTCTFYGTANTNQMVMEVMGL
HLPGASFVHPATPLRDALTDAAARQVTRLTETAGNYLPVGQLVDEKVVVNGIVSLLATGG
STNLTMHMVAMARAAGIIINWDDFSELSDAVPLLCRIYPNGPADINQFQAAGGVALVVRE
LLKHGLLHEDVHTVAGFGLARYTQEPWLDNGQLAWREGVESSLDAKVIASLAQPFEHHGG
TKVLSGNLGRAVMKTSAVPTDNQIIEAPAVVFESQHDIVPAFEAGKLDRDCVVVVRFQGP
QANGMPELHKLMPPLGVLMDRGFKVALVTDGRLSGASGKVPSAIHVTPEAYTGGLLAKVQ
NGDPIRVNGRTGELELLVDADVLAQRAPSQPDLSAEHVGCGRELFGALRSQLSGAEQGAC
CIKF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatccaaccctatctcgtgtcacacagcgcatcatcgaacgctccaaagagagc
cgaaccgcctatctggcgcgcatcgaggccgcccgctcccaaaccgtgcaccgcgcccaa
ctggcctgcggcaacctggcgcacggctttgccgcctgccagccggatgacaaaaccgcg
ctgaaaaatatggtgcgcagcgatatcgccatcatcaccgcctataacgacatgctttcc
gcccaccagccgtatgagaactacccacagcggctgaaacaggcgctgcacgcggtaggc
gctgtcggccaggtagccggcggcgtaccggcgatgtgcgacggcgtgacccaggggcag
gacggcatggagctgtcgctgatgagccgcgacgtaatcgctatgtcttcagccatcggg
ctgtcgcacaacatgttcgacggtgcgctgttcctcggcatctgcgacaaaatcgtgccg
ggtctggtgatgtccgccctgtccttcggccatttgccggcgctgtttgtgcccgccggc
ccgatgagcagcggtctgccgaacaaagagaaagtgcgcgtgcgccagctgtacgccgaa
ggcaaggctgaccgcctggcgctgctggaagcggaggccgcctcttatcacggcatcggc
acctgcaccttctacggcaccgccaacaccaaccagatggtgatggaagtgatgggtctg
cacctgccgggcgcgtcctttgttcacccggccacgccgctgcgcgacgcgctgaccgac
gccgccgcacgccaggtcacccgcctgaccgaaaccgccggcaattatctgcccgtcggc
caactggtggatgagaaagtggtggtgaacggcattgtttcgctgctggccaccggcggc
tccaccaacctgaccatgcacatggtggcgatggcgcgcgccgcaggcatcatcatcaac
tgggacgatttctcagaactgtcggatgcggtgccgctgctgtgccgcatctacccgaac
ggcccggcggacatcaatcagttccaggctgcgggcggcgtagccttggtggtacgcgag
cttttgaagcatggcctgctgcacgaggacgtgcacaccgtggccggttttggcctggcg
cgttacacccaggagccgtggctggataacggccaactggcctggcgtgaaggggtggaa
agttcgctcgacgccaaggttatcgccagccttgcccaaccgttcgaacatcacggtggc
accaaggtgctttccggcaacctcggccgggcggtgatgaaaacctcggcggtgccgacc
gacaatcagattatcgaagcgccggcggtagtcttcgaaagccagcacgacatcgtaccg
gcgttcgaggccggcaaactggaccgcgactgcgtggtggtcgtgcgcttccaggggcca
caggccaacggcatgccggagctgcacaagctgatgccaccgctgggcgtgttgatggac
cgcggttttaaagtggcgctggtgaccgacggccgcctgtccggcgcttccggcaaggtg
ccttccgccatccacgtgactccggaagcctacaccggtggcctgctggcgaaggtgcaa
aacggcgacccgatccgcgttaacggccgcaccggcgagctggaactgttggtcgacgcc
gatgtgctggcgcagcgcgccccctctcagccggacctgagcgcggaacacgtcggttgc
ggccgcgaactgttcggcgccttgcgcagccagctttccggcgctgaacaaggtgcctgc
tgcatcaaattttaa
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