Serratia plymuthica 4Rx13: SOD_c46370
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Entry
SOD_c46370 CDS
T02710
Symbol
rfaF
Name
(GenBank) ADp-heptose--LpS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00540
Lipopolysaccharide biosynthesis
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SOD_c46370 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
SOD_c46370 (rfaF)
Enzymes [BR:
srl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
SOD_c46370 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
Core region
SOD_c46370 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
AGO57573
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All DBs
Position
5212014..5213060
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLG
HGALALGERRRLGRALRANGYDRAYVLPNSFKSALVPFFAQVPQRTGWRGEMRYGLLNDI
RVLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQLQVSDEEIAETTAAFNLTDHR
PIIGFCPGAEFGPAKRWPHYHYAQLAQMLIDQGYQIALFGSAKDHEAGEQIRATLDDDAR
GFCMNLAGETQLEQAVILLASCQAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSD
KAKVIRLISGYHKIRKGDADQGYHQSLIDIQPQQVLDALTPLLAASEE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggttatcggcccttcgtgggttggcgatatgatgatgtcgcaaagtctc
taccgcaccctgaaggccgagcacccgacagcggaaattgacgtgatggcgcctgcctgg
tgccgtccgttgctggcgcgtatgccggaggtcaatcaggctctgtcgatgccgttaggc
cacggcgcgctggcgctcggtgaacgccggcgcttggggcgcgccctgcgcgccaacggc
tacgatcgcgcttatgtgctgcccaactcgttcaaatccgcgttggtgccgttcttcgcc
caggtgccgcagcggaccggttggcgtggcgaaatgcgctacggtctgctcaatgatatc
cgcgtcctggacaaagccgcctttccattgatggtacagcgctatgtggcgctggcttac
gacaagcaacgcattcagcgcgccgaagatctgccgcaaccgctgctgtggccgcagttg
caggtaagcgacgaagaaattgccgaaaccaccgcggccttcaacctgacagatcaccgg
ccgattatcggtttctgcccaggggccgaatttggcccggccaaacgttggccgcactac
cactacgcccagttggcgcagatgctgatcgatcagggttatcaaatcgcgctgttcggc
tcagccaaggatcacgaagcgggcgaacaaatccgcgcgacgctggatgacgacgcccga
ggattttgcatgaatctggccggggaaactcagctggagcaggccgtgatcctgctggcg
tcctgccaggccgtggtcagcaacgactcaggcctgatgcacgttgcagcggcattgaac
aaaccgctgatagcattgtacggcccaagcagcccggatttcacgccgccgctgtccgat
aaagccaaagtgatccgcttaatcagtggttaccataagatacgcaaaggcgatgccgat
cagggttaccatcagagcctgatcgatattcagccacagcaggtgttggacgcgctgacg
ccgttacttgccgccagcgaggaataa
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