Serratia plymuthica 4Rx13: SOD_c46480
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Entry
SOD_c46480 CDS
T02710
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase WaaA
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00540
Lipopolysaccharide biosynthesis
srl01100
Metabolic pathways
Module
srl_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SOD_c46480 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
SOD_c46480 (waaA)
Enzymes [BR:
srl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SOD_c46480 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SOD_c46480 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SOD_c46480 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SOD_c46480 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
Lipid A
SOD_c46480 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
AGO57584
LinkDB
All DBs
Position
5224194..5225471
Genome browser
AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWAERYGFCAGKVVPGGIMLHSVSVGE
TLAAIPLVRALRHRYPYLPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGSMRRFLDQ
VNPKLVIIMETELWPNLINALHQRQIPLVIANARLSARSAAGYKKIGGFVRDMLRRITLI
AAQNQEDGERFIELGLKRSQLTVTGSLKFDISVTPELAARAITLRRQWAPRRPVWIATST
HEGEETILLAAHRKLLEKHPDLLLILVPRHPERFSTAKELVQKAGFSYTLRSSGEIPSGS
TQVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHIFNFKDICA
KLSQAEGLITVADEDSLVKEVATLLTDEDYRRYYGRHAVEVLYQNQGALQRLLQLLEPHL
PPRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtttatatcaggtactactctacctcatccaacccctgatctggctccgc
ttactgctgcgcagccgcaaagctccagcctaccgtaaacgctgggcagaacgctatggc
ttctgcgccggaaaagtggtgccgggcggcatcatgctgcattccgtctccgtgggggaa
acgctggcagccatcccgttggtccgcgcgctgcgacaccgctatccctatttaccgatt
actgtgaccacgatgacgccaactggttcagagcgcgttcagtccgctttcggtaaagac
gttcatcatgtttatctgccttacgacctgcccggctccatgcgccgtttcctcgatcag
gtgaaccccaagctggttatcatcatggagaccgagctgtggccaaatctgattaacgcg
ctgcatcagcgtcagatcccgctggtgatcgccaacgcacgcctttccgctcgctctgcc
gccggttataaaaaaatcggcggttttgtccgcgacatgctgcgccgcattacgctaatc
gccgcgcaaaatcaggaagatggcgaacgctttatcgaacttggcctgaaacgctcgcag
ctgaccgtgaccggcagcctgaaattcgacatttccgtcactcccgagctggctgcgcgc
gcgatcacgttacgccgccaatgggcaccgcgtcgcccggtgtggatcgcgaccagcact
catgaaggtgaagaaaccattctgctggcggcacaccgcaagctgctggaaaaacatccc
gacctgctgctgatcctggtgccgcgtcaccctgaacgtttctctaccgccaaagaactg
gtgcagaaagccggtttcagctacaccctgcgcagcagcggtgaaatcccctccggcagc
acccaggtggtgattggcgataccatgggcgaactgatgctgctgtacggcattgccgac
ctggcctttgtcggcggcagcctggtggaacgcggcgggcataatccgctggaagccgcc
gcacacgccattccggtgctgatggggccgcatatcttcaactttaaagatatctgcgcc
aagttatcgcaggccgaagggctgatcaccgtggccgacgaggactcgctggtcaaggaa
gtcgccactctgctcaccgacgaagactatcgccgctattacggccgccacgccgtggaa
gtgctgtatcagaatcagggagcgctgcagcgcctgctgcaactgttggaaccgcacctg
ccgccacggagccattaa
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