Salinibacter ruber M8: SRM_02252
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Entry
SRM_02252 CDS
T01209
Name
(GenBank) Deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02252
Enzymes [BR:
srm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SRM_02252
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SRM_02252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
HTH_63
Motif
Other DBs
NCBI-ProteinID:
CBH25173
UniProt:
D5HAW8
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All DBs
Position
2600869..2602413
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AA seq
514 aa
AA seq
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MRTLILVLRDQLDRDATVLHEADPGRDAVAMTEADVHRDRYAEHKQRLALGFAAMRHYRA
DLRDDGWTVHYQPADAPAGAEDAPAFLRQQLAEHQPERVAMTEPGRHALLETIEGVCEEM
GVPLRVHADDHFLATHDTFEQWADGRKELTLEYFYRERRREYDVLVTDDGDPVGGDWNFD
DDNQESFGADGPGMVPEGPAFERDAMTEDVLDLVRTQFADAPGALDAFRWPVTPAQARAA
LADFVEHRLPNFGTYQDAMWTGRAFLYHSRLSCALNLKLLDPMTAVRAAEEAYHDDHAPL
NAVEGFVRQILGWREFVRGVYWLHAPEYVDRNALEATEDLPEFYWTGDTDMRCLSECTGQ
VREHAYAHHIPRLMVMGLFGLLYGVDPQQMNEWHESMYIDAWEWVSTPNMVGMALYADGG
TVGTKPYTASGKYINRMSNYCSHCRYDPDEAVGDEACPFTSLYWNFLDRHQETFSGNRRM
NFQLANVRRKSDAELQDIAERVEEVRALTEAGEI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccctgattctcgtcctccgggaccaacttgaccgcgacgccaccgtcctgcac
gaggccgaccccggccgcgacgccgtggcgatgacggaggcggacgtgcaccgggaccga
tacgcggagcacaagcagcgcctcgccctcggcttcgcggcgatgcgccactaccgggcg
gacctgcgcgacgacggctggaccgtccactaccagccggccgacgccccggccggggcc
gaggacgcccccgccttcctgcggcaacagctcgccgagcatcagcccgagcgcgtcgcc
atgaccgagccgggacgtcatgcgcttctggagacgatcgaaggggtgtgcgaggagatg
ggcgtcccgctccgcgtccacgccgacgaccactttctggccacccacgacaccttcgag
cagtgggccgatgggcgcaaggagctaacactggagtacttctaccgcgagcggcgccgc
gagtacgacgtcctcgtcaccgacgacggcgaccctgtggggggcgactggaatttcgac
gacgacaaccaggagagctttggggcggacgggccgggcatggtgccggagggccccgcg
ttcgagcgcgacgccatgaccgaagatgtgctcgacctggtgcgcacccagtttgccgac
gcgccgggggcgctcgacgcgtttcgatggccggtgacgcccgcccaggcccgggccgcc
ctcgcggacttcgtggagcaccggctgccgaacttcggcacgtaccaggacgcgatgtgg
acgggccgggcctttctctaccactcgcgcctctcgtgtgcgctgaacctgaagctgctc
gaccccatgaccgcggtgcgggccgccgaggaggcgtaccacgacgaccatgcccccctc
aacgccgtggaggggttcgtgcgccagattctcggctggcgcgagttcgtgcggggcgtg
tactggctgcacgcccccgagtacgtggaccgcaacgcgctggaggcaaccgaagacctt
ccggagttctactggaccggcgacacggacatgcggtgcctgagcgagtgcacgggacag
gtccgggagcacgcgtacgcccaccacatcccacgcctcatggtgatggggctcttcggg
ctgctctacggcgtcgacccgcagcagatgaacgagtggcacgagtcgatgtacatcgac
gcctgggagtgggtctccacccccaacatggtcgggatggccctgtacgccgacgggggc
accgtgggcaccaagccgtacacggcctccgggaagtacatcaaccggatgagcaactac
tgctcgcactgccgctacgacccggacgaggccgtcggggacgaggcctgtcccttcacc
tcgctctactggaacttcctagaccggcatcaggagaccttctcgggcaaccggcgcatg
aactttcaactcgccaacgtccggcgaaagtccgacgcggagctgcaggacattgccgag
cgggtggaggaggtgcgggccctcaccgaggcgggcgaaatttaa
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