KEGG   Streptomyces rubrolavendulae: A4G23_04165
Entry
A4G23_04165       CDS       T04616                                 
Symbol
sigD_3
Name
(GenBank) RNA polymerase sigma-D factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
srn  Streptomyces rubrolavendulae
Pathway
srn02020  Two-component system
srn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:srn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A4G23_04165 (sigD_3)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A4G23_04165 (sigD_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srn03021]
    A4G23_04165 (sigD_3)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:srn02035]
    A4G23_04165 (sigD_3)
Transcription machinery [BR:srn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A4G23_04165 (sigD_3)
Bacterial motility proteins [BR:srn02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    A4G23_04165 (sigD_3)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF Closter_coat HTH_23 HTH_31 EutK_C UPF0122
Other DBs
NCBI-ProteinID: AOT61282
UniProt: A0A1D8G752
LinkDB
Position
4814799..4815638
AA seq 279 aa
MPQHTSGSDRAAVPPPAARSSVRPSAPSSLDELWRSYKDTGDERLREQLILHYSPLVKYV
AGRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDLDRSIKFETYAITRIRGAMIDELRALD
WIPRSVRQKARAVERAYATLEAQLRRTPSEGEVAAEMGIPVEDLHAVFSQLSLANVVALE
ELLHAGGEGGDRLSLMDTLEDTAADDPVEVAEGRELRRLLARAINTLPDREKTVVTLYYY
EGLTLAEIGHVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq 840 nt   +upstreamnt  +downstreamnt
atgccccagcacacctccgggtccgaccgcgccgcggttccaccgcccgctgcccggagc
agcgtgcggccgtccgccccctcgtcgctggacgagctgtggcggtcgtacaaggacacc
ggtgacgagcggctgcgggagcagctgatcctgcactactcgcccctcgtcaagtacgtc
gcgggccgggtcagcgtcggcctcccctccaacgtcgagcaggcggacttcgtctcctcc
ggggtcttcgggctgatcgacgcgatcgagaagttcgacctcgaccggtcgatcaagttc
gagacgtacgcgatcacccgcatccgcggggccatgatcgacgagctgcgggcgctggac
tggatcccccgatccgtccggcagaaggccagggccgtggagcgggcctacgccacgctg
gaggcgcagctgcggcgcaccccctccgagggcgaggtcgccgccgagatgggcatcccc
gtcgaggatctccacgcggtgttcagccagctctccctggccaacgtcgtggccctggag
gaactgctgcacgccggcggggagggcggcgaccggctcagcctcatggacaccctggag
gacaccgccgccgacgaccccgtcgaggtggccgagggccgcgaactgcgccggctgctc
gcccgtgccatcaacaccctcccggaccgggagaagacggtcgtcacgctctactactac
gagggcctcaccctcgccgagatcggccacgtcctgggcgtcacggagagccgtgtcagc
cagatccacaccaagtccgtcctccagttgcgggcgaagctggccgatgtcggacgctga

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