Streptomyces rubrolavendulae: A4G23_04165
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Entry
A4G23_04165 CDS
T04616
Symbol
sigD_3
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn02020
Two-component system
srn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4G23_04165 (sigD_3)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4G23_04165 (sigD_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_04165 (sigD_3)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
srn02035
]
A4G23_04165 (sigD_3)
Transcription machinery [BR:
srn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4G23_04165 (sigD_3)
Bacterial motility proteins [BR:
srn02035
]
Flagellar system
Flagellar assembly proteins
Stator
A4G23_04165 (sigD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
Closter_coat
HTH_23
HTH_31
EutK_C
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AOT61282
UniProt:
A0A1D8G752
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All DBs
Position
4814799..4815638
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AA seq
279 aa
AA seq
DB search
MPQHTSGSDRAAVPPPAARSSVRPSAPSSLDELWRSYKDTGDERLREQLILHYSPLVKYV
AGRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDLDRSIKFETYAITRIRGAMIDELRALD
WIPRSVRQKARAVERAYATLEAQLRRTPSEGEVAAEMGIPVEDLHAVFSQLSLANVVALE
ELLHAGGEGGDRLSLMDTLEDTAADDPVEVAEGRELRRLLARAINTLPDREKTVVTLYYY
EGLTLAEIGHVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgcgccgcggttccaccgcccgctgcccggagc
agcgtgcggccgtccgccccctcgtcgctggacgagctgtggcggtcgtacaaggacacc
ggtgacgagcggctgcgggagcagctgatcctgcactactcgcccctcgtcaagtacgtc
gcgggccgggtcagcgtcggcctcccctccaacgtcgagcaggcggacttcgtctcctcc
ggggtcttcgggctgatcgacgcgatcgagaagttcgacctcgaccggtcgatcaagttc
gagacgtacgcgatcacccgcatccgcggggccatgatcgacgagctgcgggcgctggac
tggatcccccgatccgtccggcagaaggccagggccgtggagcgggcctacgccacgctg
gaggcgcagctgcggcgcaccccctccgagggcgaggtcgccgccgagatgggcatcccc
gtcgaggatctccacgcggtgttcagccagctctccctggccaacgtcgtggccctggag
gaactgctgcacgccggcggggagggcggcgaccggctcagcctcatggacaccctggag
gacaccgccgccgacgaccccgtcgaggtggccgagggccgcgaactgcgccggctgctc
gcccgtgccatcaacaccctcccggaccgggagaagacggtcgtcacgctctactactac
gagggcctcaccctcgccgagatcggccacgtcctgggcgtcacggagagccgtgtcagc
cagatccacaccaagtccgtcctccagttgcgggcgaagctggccgatgtcggacgctga
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