Streptomyces rubrolavendulae: A4G23_04321
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Entry
A4G23_04321 CDS
T04616
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G23_04321 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srn03019
]
A4G23_04321 (recQ_2)
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_04321 (recQ_2)
Enzymes [BR:
srn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G23_04321 (recQ_2)
Messenger RNA biogenesis [BR:
srn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G23_04321 (recQ_2)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4G23_04321 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
AAA_22
DUF826
Motif
Other DBs
NCBI-ProteinID:
AOT61434
UniProt:
A0A1D8G7L3
LinkDB
All DBs
Position
5013319..5015481
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AA seq
720 aa
AA seq
DB search
MDDLELRTEADTILAQLVGDPAGSARLREDQWQAVAALVKERRRALVVQRTGWGKSAVYF
VATALLRRRGAGPTVIVSPLLALMRNQVEAAERAGIRARTINSANPEEWTGVYGEVERGE
TDVLLVSPERLNSVDFREQVLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRSMLADL
APGVPVLATTATANARVTADVAEQLGTGAGEALVLRGPLDRESLRLGVVRLPDAAHRLAW
LAEHLDELPGSGIVYALTVAAAEEATAFLRQRGFAVSSYTGRTENADRLQAETDLQANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLMLPGKEDEAI
WRYFADTAFPPEAQVRQTLAALAEAGRPLSVPALEAAVELRRTRLETMLKVLDVDGAVKR
VKGGWTSTGEPWVYDAERYARVRRQREAEQQAMRDYVGTSRCRMEFLRRQLDDEGAAPCG
RCDNCAGAWIGAAVSAEALDGAVRELDRPGVEVEPRRMWPTGMAALGVELRGRIPAGEQC
STGRALGRLSDIGWGNRLRPLLAEGAPDGPVPDDVLRAAVAVLADWARSPGGWASDAPDA
TARPTGVVAVPSLTRPRLVDTLARGIAEVGRLPYLGALAYTGGEGAHSARRSNSAQRLRA
LSGAFAVPDELAGALAAHPGPVLLVDDYTDSGWTLAVAARLLRRAGGGAPVLPLVLAAAG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcgagctccgcaccgaagccgacaccatcctcgcccagctggtcggcgac
cccgcggggtcggcccggctccgggaggaccagtggcaggccgtcgcggccctggtgaag
gagcgccgcagagccctggtcgtgcagcgcaccggctggggcaagtccgccgtgtacttc
gtcgccaccgccctgctgcgccgccgcggcgccggtcccaccgtgatcgtctcaccgctg
ctggcgctcatgcgcaaccaggtcgaggcggcggagcgggccggcatccgggcccgcacg
atcaactccgccaacccggaggagtggaccggcgtctacggggaggtggagcgcggcgag
accgacgtcctgctcgtcagcccggagcggctcaactccgtcgacttccgcgagcaggtg
ctgcccaagctcgcggccacgacgggcctgctggtggtcgacgaggcgcactgcatctcc
gactggggccacgacttccgcccggactaccggcggctgcgctcgatgctcgccgacctc
gcccccggcgtgccggtactggccaccacggcgaccgccaacgcccgcgtgaccgcggac
gtggccgagcagctcggcacgggcgcgggggaggccctggtgctgcgcggcccgctggac
cgggagagcctgcggctcggcgtcgtgcgcctgccggacgcggcccaccgcctggcgtgg
ctcgcggagcacctggacgagctgcccggctcagggatcgtgtacgccctgacggtcgcc
gccgccgaggaggcgaccgccttcctgcggcagcgcgggttcgcggtgtcctcgtacacg
ggccgcacggagaacgccgaccggctgcaggccgagaccgacctccaggcgaaccgggtc
aaggcgctcgtggccacctccgcgctcggcatgggcttcgacaagccggacctgggcttc
gtggtgcacctcggttcgccgtcctcgccgatcgcctactaccagcaggtggggcgggcg
gggcgcggcgtggagcacgcggaggtgctgatgctgcccggcaaggaggacgaggcgatc
tggcgctacttcgccgacacggccttcccgcccgaggctcaggtgcgccagaccctcgcg
gccctcgccgaggccgggcggccgctctccgtgcccgccctggaggcggcggtggagctg
cgccgcacccgtctggagaccatgctgaaggtcctcgacgtcgacggggcggtgaagcgg
gtcaagggcggctggacctcgaccggcgagccctgggtgtacgacgccgagcgctacgcg
cgcgtgcggcgccagcgggaggccgagcagcaggccatgcgcgactacgtgggcacgtcg
cggtgccggatggagttcctgcggcggcagctggacgacgagggcgcggcgccgtgcggc
cgctgcgacaactgcgcgggcgcctggatcggtgccgcggtgtcggccgaggcgctggac
ggggccgtgcgggagctggaccgccccggtgtggaggtggagccgcgccgcatgtggccg
accgggatggccgccctgggcgtcgagctcagggggcgcatcccggccggcgagcagtgc
tccaccgggcgggccctcgggaggctctccgacatcggctggggcaaccggctgcgcccg
ctgctggccgagggcgctcccgacgggccggtccccgacgacgtcctgcgggccgccgtg
gcggtactcgccgactgggcgcgctcaccgggtggctgggcgtcggacgcgccggacgcc
accgcccgcccgaccggtgtcgtcgccgtaccgtccctgacccgcccgcgactggtggac
accctcgcgcgggggatcgccgaggtcgggcggctgccctacctgggagccctcgcgtac
accggtggggagggcgcgcactcggcgcgccgcagcaactcggcccagcgcctgagggcg
ctgtccggcgcgttcgcggtcccggacgagctggccggggcgctggcagcccatcccggc
cccgtactcctcgtggacgactacacggactccggctggaccctcgcggtcgcggcccgg
ctcctgcgccgcgcgggcggcggcgcgccggtcctccccctggtcctcgccgcggcgggc
tga
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