KEGG   Streptomyces rubrolavendulae: A4G23_04321
Entry
A4G23_04321       CDS       T04616                                 
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
srn  Streptomyces rubrolavendulae
Pathway
srn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4G23_04321 (recQ_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srn03019]
    A4G23_04321 (recQ_2)
   03400 DNA repair and recombination proteins [BR:srn03400]
    A4G23_04321 (recQ_2)
Enzymes [BR:srn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4G23_04321 (recQ_2)
Messenger RNA biogenesis [BR:srn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A4G23_04321 (recQ_2)
DNA repair and recombination proteins [BR:srn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4G23_04321 (recQ_2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 RecQ_Zn_bind Pribosyltran AAA_22 DUF826
Other DBs
NCBI-ProteinID: AOT61434
UniProt: A0A1D8G7L3
LinkDB
Position
5013319..5015481
AA seq 720 aa
MDDLELRTEADTILAQLVGDPAGSARLREDQWQAVAALVKERRRALVVQRTGWGKSAVYF
VATALLRRRGAGPTVIVSPLLALMRNQVEAAERAGIRARTINSANPEEWTGVYGEVERGE
TDVLLVSPERLNSVDFREQVLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRSMLADL
APGVPVLATTATANARVTADVAEQLGTGAGEALVLRGPLDRESLRLGVVRLPDAAHRLAW
LAEHLDELPGSGIVYALTVAAAEEATAFLRQRGFAVSSYTGRTENADRLQAETDLQANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLMLPGKEDEAI
WRYFADTAFPPEAQVRQTLAALAEAGRPLSVPALEAAVELRRTRLETMLKVLDVDGAVKR
VKGGWTSTGEPWVYDAERYARVRRQREAEQQAMRDYVGTSRCRMEFLRRQLDDEGAAPCG
RCDNCAGAWIGAAVSAEALDGAVRELDRPGVEVEPRRMWPTGMAALGVELRGRIPAGEQC
STGRALGRLSDIGWGNRLRPLLAEGAPDGPVPDDVLRAAVAVLADWARSPGGWASDAPDA
TARPTGVVAVPSLTRPRLVDTLARGIAEVGRLPYLGALAYTGGEGAHSARRSNSAQRLRA
LSGAFAVPDELAGALAAHPGPVLLVDDYTDSGWTLAVAARLLRRAGGGAPVLPLVLAAAG
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgacctcgagctccgcaccgaagccgacaccatcctcgcccagctggtcggcgac
cccgcggggtcggcccggctccgggaggaccagtggcaggccgtcgcggccctggtgaag
gagcgccgcagagccctggtcgtgcagcgcaccggctggggcaagtccgccgtgtacttc
gtcgccaccgccctgctgcgccgccgcggcgccggtcccaccgtgatcgtctcaccgctg
ctggcgctcatgcgcaaccaggtcgaggcggcggagcgggccggcatccgggcccgcacg
atcaactccgccaacccggaggagtggaccggcgtctacggggaggtggagcgcggcgag
accgacgtcctgctcgtcagcccggagcggctcaactccgtcgacttccgcgagcaggtg
ctgcccaagctcgcggccacgacgggcctgctggtggtcgacgaggcgcactgcatctcc
gactggggccacgacttccgcccggactaccggcggctgcgctcgatgctcgccgacctc
gcccccggcgtgccggtactggccaccacggcgaccgccaacgcccgcgtgaccgcggac
gtggccgagcagctcggcacgggcgcgggggaggccctggtgctgcgcggcccgctggac
cgggagagcctgcggctcggcgtcgtgcgcctgccggacgcggcccaccgcctggcgtgg
ctcgcggagcacctggacgagctgcccggctcagggatcgtgtacgccctgacggtcgcc
gccgccgaggaggcgaccgccttcctgcggcagcgcgggttcgcggtgtcctcgtacacg
ggccgcacggagaacgccgaccggctgcaggccgagaccgacctccaggcgaaccgggtc
aaggcgctcgtggccacctccgcgctcggcatgggcttcgacaagccggacctgggcttc
gtggtgcacctcggttcgccgtcctcgccgatcgcctactaccagcaggtggggcgggcg
gggcgcggcgtggagcacgcggaggtgctgatgctgcccggcaaggaggacgaggcgatc
tggcgctacttcgccgacacggccttcccgcccgaggctcaggtgcgccagaccctcgcg
gccctcgccgaggccgggcggccgctctccgtgcccgccctggaggcggcggtggagctg
cgccgcacccgtctggagaccatgctgaaggtcctcgacgtcgacggggcggtgaagcgg
gtcaagggcggctggacctcgaccggcgagccctgggtgtacgacgccgagcgctacgcg
cgcgtgcggcgccagcgggaggccgagcagcaggccatgcgcgactacgtgggcacgtcg
cggtgccggatggagttcctgcggcggcagctggacgacgagggcgcggcgccgtgcggc
cgctgcgacaactgcgcgggcgcctggatcggtgccgcggtgtcggccgaggcgctggac
ggggccgtgcgggagctggaccgccccggtgtggaggtggagccgcgccgcatgtggccg
accgggatggccgccctgggcgtcgagctcagggggcgcatcccggccggcgagcagtgc
tccaccgggcgggccctcgggaggctctccgacatcggctggggcaaccggctgcgcccg
ctgctggccgagggcgctcccgacgggccggtccccgacgacgtcctgcgggccgccgtg
gcggtactcgccgactgggcgcgctcaccgggtggctgggcgtcggacgcgccggacgcc
accgcccgcccgaccggtgtcgtcgccgtaccgtccctgacccgcccgcgactggtggac
accctcgcgcgggggatcgccgaggtcgggcggctgccctacctgggagccctcgcgtac
accggtggggagggcgcgcactcggcgcgccgcagcaactcggcccagcgcctgagggcg
ctgtccggcgcgttcgcggtcccggacgagctggccggggcgctggcagcccatcccggc
cccgtactcctcgtggacgactacacggactccggctggaccctcgcggtcgcggcccgg
ctcctgcgccgcgcgggcggcggcgcgccggtcctccccctggtcctcgccgcggcgggc
tga

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