Streptosporangium roseum: Sros_6926
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Entry
Sros_6926 CDS
T01137
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sro
Streptosporangium roseum
Pathway
sro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sros_6926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sro03019
]
Sros_6926
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_6926
Enzymes [BR:
sro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sros_6926
Messenger RNA biogenesis [BR:
sro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sros_6926
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sros_6926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACZ89629
UniProt:
D2B7A4
LinkDB
All DBs
Position
complement(7636506..7638392)
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AA seq
628 aa
AA seq
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MVSPVSGPEVSDALRVLHRVFGYDSFREGQQEIIDHVVAGGDALVLMPTGGGKSLCYQIP
ALVRDGVGVVVSPLIALMQDQVDALTALGVRAGFLNSTQDHDERRQVESAFLAGELDLLY
LAPERLRVDSTLRLLDRGTISLFAIDEAHCVAQWGHDFRPDYLALSALHERWPDVPRIAL
TATATEATHAEIASRLNLEEARHFVSSFDRPNIQYRIAPKNEPKRQLLKLLRTEHPGDAG
IVYCLSRSSVEKTAEFLVQNGISALPYHAGLDARTRAANQARFLREDGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSVAWLAYGLQDVVQQRKMIDTSEGDE
THRRRLGTHLDAMLALCEAVECRRVRLLAYFGQDSTACGNCDTCLTPPESWDGTIAAQKL
LSTVLRLLRERRQKFGAGQIIDILLGRKTPKVTQFDHHSLTVFGIGTELGEAEWRGVVRQ
LLAQGLLTVEGDYGTLLLTEASAEVLSRQRQVLLRREPERAARTRSEPSARAGGARRATP
ADLPEEAVPVFERLRAWRAATAKEQGVPAYVIFHDATLREIATGVPSSLAELGEVSGVGE
NKLAKYGRQILDTLAQDAVEPDQALIFP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcccgtgagcggtcccgaggtgagcgacgcgctgcgagtgctgcaccgcgtc
ttcggctacgactcgttccgggaagggcagcaagagatcatcgaccacgtcgtcgccggc
ggtgacgcgctggtgctgatgccgaccggtggcggcaagtcgctgtgctaccagatcccc
gccctcgtgcgggacggcgtcggcgtcgtcgtctcaccgctcatcgccctcatgcaggac
caggtcgacgccctgacggccctgggcgtgcgggcggggttcctcaactccacgcaggac
cacgacgagcgccgtcaggtcgagtccgccttcctggcgggtgagctggacctgctctac
ctggcgccggagcgcctgcgggtcgattcgacgctgcggctgctcgaccgcggcacgatc
tccctgttcgccatcgacgaggcgcactgcgtggcccagtgggggcatgacttccggccc
gactacctcgcgctgtccgcgctgcacgagcgctggcccgacgtgccccgcatcgccctg
acggcgaccgccaccgaggccacccacgccgagatcgcctcccggctgaacctggaggaa
gcccgccacttcgtgtcgagcttcgaccgcccgaacatccagtaccgcatcgcgccgaag
aacgagcccaagcggcaactgctcaagctgctgcgcaccgagcaccccggggacgccggc
atcgtctactgcctgtcgcgctcctcggtcgagaagaccgccgagttcctggtgcagaac
ggcatctcggcgctgccctaccacgcggggctcgacgcgcgcacccgggcggccaaccag
gcgcggttcctgcgggaggacggcctcgtcatggtcgccaccatcgcgttcggcatgggc
atcgacaaacccgacgtgcggttcgtcgcccatctcgatctgcccaagtccgtcgagggc
tactaccaggagaccggccgggccggacgtgacggcctcccctccgtcgcctggctggcc
tacgggctccaggacgtcgtgcagcagcgcaagatgatcgacacctccgagggcgacgag
acccaccggcgccgcctgggcacccatctcgacgccatgctcgccctctgcgaggcggtc
gagtgccgccgcgtgcgcctgctcgcctacttcggccaggacagcacggcgtgcggcaac
tgcgacacgtgcctgacgccgccggagtcgtgggacggcacgatcgccgcccagaaactc
ctgtcgaccgtgctcaggctcctgcgcgagcggcgccagaagttcggcgcgggccagatc
atcgacatcctgctcggcaggaagacgccgaaggtcacccagttcgaccaccactccctg
acggtgttcggcatcggcacggagctgggcgaggccgagtggcgcggcgtggtgcgccag
ctgctggcccagggcctgctgaccgtcgagggcgactacggcacgctgctgctcaccgag
gcgagcgccgaggtgctgagccggcagcgccaggtcctgctgcggcgtgagcccgagcgg
gcggcgcgcaccagatccgagccgtcggcacgggccggtggggcccgccgcgccaccccc
gcggacctgcccgaggaggccgtgccggtgttcgagcggctccgcgcctggcgcgcggcc
accgccaaggagcagggcgtgcccgcctacgtgatcttccacgacgcgaccctgcgcgag
atcgcgaccggggtcccgtcctccctggccgagctgggagaggtgagcggtgtcggcgag
aacaaactggcgaagtacggccggcagatcctggacaccctcgcgcaggacgccgtcgag
cccgatcaggctctcatcttcccctga
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