Serratia sp. AS12: SerAS12_3840
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Entry
SerAS12_3840 CDS
T01502
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
srs
Serratia sp. AS12
Pathway
srs00260
Glycine, serine and threonine metabolism
srs00460
Cyanoamino acid metabolism
srs00630
Glyoxylate and dicarboxylate metabolism
srs00670
One carbon pool by folate
srs00680
Methane metabolism
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
srs01120
Microbial metabolism in diverse environments
srs01200
Carbon metabolism
srs01230
Biosynthesis of amino acids
srs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SerAS12_3840
09102 Energy metabolism
00680 Methane metabolism
SerAS12_3840
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SerAS12_3840
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SerAS12_3840
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SerAS12_3840
Enzymes [BR:
srs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SerAS12_3840
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AEF51893
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Position
complement(4108746..4109999)
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AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVPYGINEKGEIDYDDLAKQAQTHKPKMIIGGFSAFSGL
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVADNAKAMVK
VFLERGYKVVSGGTHNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAVTRRGFKTAEVTELAGWICDVLDNINDEATIERTKKKVLEICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcgtgcaatggag
caagaagtcgtgcgtcaggaagagcacattgaactgattgcgtctgagaactacaccagc
ccacgcgtaatgcaggctcagggttcccagttgaccaacaaatacgctgaaggctatccg
ggcaagcgttattacggcggctgcgaatacgtggatatcgttgagcaattggccatcgac
cgtgctaaagagctgtttggcgcagattacgccaacgttcagccgcactccggctcccag
gctaacttcgccgtctacaccgcgctgctgcagccgggcgacaccattctgggcatgaac
ctggcgcacggcggccacctgacccacggttcaccggtcaacctgtccggcaagctgtac
aacgtggtgccttacggcatcaacgaaaaaggcgaaatcgactacgacgatctggccaag
caagcgcagacccacaaaccaaaaatgatcatcggcggcttctcagccttctccggtctg
gttgactgggcaaaaatgcgtgaaatcgcagacagcatcggtgcttacctgttcgttgac
atggcgcacgttgcgggcctgatcgccgccggcgtttatccgaacccggttccgcacgcg
cacatcgtcaccaccaccacccacaaaaccctggcgggtccgcgtggcggcttgatcctg
gcgaagggcggtgatgaagatctgtacaagaagctgaactccgccgtattccctggcggc
cagggcggcccgctgatgcatgtgattgccggtaaagcggtagcgctgaaagaagcgatg
gagcctgagttcaaggtttaccagcagcaagtcgccgataacgccaaagcgatggtgaag
gtgttcctggagcgcggctacaaagtggtctccggcggtactcataaccacctgttcctg
ctggacctggttgacaaaaacctgaccggtaaagaagctgacgcagccctgggccgcgcc
aatatcaccgtgaacaaaaacagcgtgccgaacgatccgaagagcccgttcgttacctct
ggcatacgtatcggtacgccggctgtgacccgccgtggcttcaaaactgctgaagtgact
gagttggccggttggatctgcgacgtgctggacaacatcaacgatgaagccaccatcgaa
cgcaccaagaagaaagtgctggagatctgcgcccgcctgccggtctacgcataa
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