KEGG   Streptomyces reticuli: TUE45_05820Help
Entry
TUE45_05820       CDS       T04246                                 

Definition
(GenBank) Putative DNA ligase-like protein/MT0965
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
srw  Streptomyces reticuli
Pathway
srw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:srw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    TUE45_05820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srw03400]
    TUE45_05820
Enzymes [BR:srw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TUE45_05820
DNA repair and recombination proteins [BR:srw03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     TUE45_05820
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: CUW31083
UniProt: A0A0U5LVF2
LinkDB All DBs
Position
I:complement(6526709..6527596)
Genome map
AA seq 295 aa AA seqDB search
MTPITEVEGRRVALSNLEKVLYPETGFTKGELLHYYATTAAALLPHLRDRAVSFLRYPDG
PEGQLFFTKNVPPGTPEWVTTAEVPRSSADSPARMVLVQDLPSLVWAANLVTEFHTHQWL
VQRPEEADRLVFDLDPGAPATIVHCCEVALWLRERLAADGIEAYPKTAGSKGLHLLAAVR
GSSSERTSEYAKALAVEAERAMPRLVVHRMTKSLRPGKVFVDWSQNAARKTTATPYTVRA
RRAPLVSAPVTWEEVADCRSPGQLELRAEDIAPRLQDLGDLMAPLLDPGSAAPVP
NT seq 888 nt NT seq  +upstreamnt  +downstreamnt
atgacgcctatcacagaggtggaggggcgccgggtcgcgctcagcaacctggagaaggtg
ctgtatccggagaccggcttcaccaaaggggagctgctgcactactacgcgaccaccgcc
gcggccctgctgccgcatctgcgcgaccgggcggtgtccttcctgcgctatccggacggc
cccgaggggcagctgttcttcacgaagaacgtgccgccgggtacgcccgagtgggtcacc
accgccgaggtgccgcggtcctcggcggacagcccggcccggatggtgctggtgcaggat
ctgccgagcctggtctgggcggcgaacctggtcaccgagttccatacgcaccagtggctg
gtgcagcgccccgaggaggcggaccggctggtcttcgacctcgatccgggcgcgcccgcg
acgatcgtgcactgctgcgaggtcgccctgtggctgcgcgagcggctcgcggcggacggg
atcgaggcgtacccgaagacggccgggtcgaaggggctgcatctgctggcggccgtgcgc
gggagttcttccgaacggacgtccgagtacgcgaaggcgctggcggtggaggccgagcgg
gcgatgccccggctggtggtgcaccggatgaccaagagcctcaggccggggaaggtgttc
gtcgactggagccagaacgcggcccgcaagaccaccgcgaccccgtacaccgtgcgggcc
cgccgagcgccgctggtgtcggcgccggtgacctgggaggaggtcgccgactgccgcagc
cccgggcagctggagctccgggcggaggacatcgcgccgcggcttcaggacctcggtgat
ctgatggcgccgctgctggatccggggtcggccgctccggttccgtga

DBGET integrated database retrieval system