Sinocyclocheilus rhinocerous: 107710476
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Entry
107710476 CDS
T04916
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107710476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107710476
Ion channels [BR:
srx04040
]
Ligand-gated channels
GABA-A
107710476
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Zip
OAD_gamma
PAP1
SOG2
Motif
Other DBs
NCBI-GeneID:
107710476
NCBI-ProteinID:
XP_016370736
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MVSAKKEMVTAMYPTSISTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYDGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMRLVDFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYITNVQAERAKRKQAKAAA
AAAAKSSTPSGKAKDTEEVLQQNSDTNGNLRKRGNSNVQSQPDSKKTQRTETSGKSGAST
SKPTLTSQSSSTSEGTTSFSSQSRLSPSSASQSNAATSSSKTTPPAPPSTPTVPEKPSPS
ATAGSAPLHHLLGPKLENIKKKEAKAAPQPAAPPTGGASKIDEYARILFPVSFGAFNMVY
WVVYLSRDTMEAKVG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctatttccactctc
ctctactttctgtgtgtggcggcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacacgcattctggaccgacttctggatggatacgac
aacaggctccgacctggatttgggggtccagtaacggaagtgaagaccgatatttacgtc
acaagtttcggcccagtttccgacgtggagatggagtacaccatggacgtgttcttccgc
cagacatgggtggataggcggttgaggtatgatggcccggtggagatcctccggctaaat
aacctgatggtgaccaaagtttggacccccgacacattcttcaggaacggcaaaagatca
gtggctcacaacatgacggcacccaacagactcttcagaatcatgaagaacggcaccatc
ctgtacactatgaggttgacaataattgcagaatgtccaatgagactcgttgatttccca
atggatggccactcctgccctctgaagtttggcagctatgcctacccaaagactgagatg
atctacacctggaccaaaggcccgcagcattctgtggaggtcccacctgagtcgtccagc
ctggtacagtacgacctgatcggacagactgtgtcaagcgagactgtaaaatcgatcaca
ggtgaatatgtggtaatgacggtctacttccacttgaaacggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttctcaagtgtctttctggata
aataaggaatccgtgcccgccagaactgtctttggaatcaccacagttctcacgatgacg
accctcagcatcagcgctcggcactctctgcccaaggtctcgtacgccactgccatggat
tggttcattgctgtgtgtttcgctttcgttttctctgctctcatcgagtttgcggctgtg
aactacatcaccaatgttcaggcagagagagccaagagaaaacaggccaaagccgccgcc
gcagccgcagccaagagctccacaccgtcaggcaaagccaaagacacagaggaggttcta
cagcaaaactcagacactaatggcaacctgcggaaacgcggcaactccaatgttcagtct
caaccagactccaagaaaacccaaagaaccgaaacgtctggcaagagcggagcatccaca
tccaaaccaaccttgaccagccaatcatcttccacctcagagggtaccaccagtttctcc
agccaatcacgtctcagccccagttctgccagccaatcaaatgcagccacttcatcctcc
aagacaacaccgccggccccgccctctacgccaacagttcccgagaaaccatcgcccagt
gcaaccgcaggttccgcccctcttcaccatctcctcgggcctaaattagagaatattaaa
aagaaggaagccaaggctgcacctcaacctgccgctcctccaaccggaggagccagcaag
atcgacgaatacgcacgtattttattcccagtgtcctttggggcattcaacatggtgtac
tgggtggtttatttgtccagagacaccatggaggcaaaggtaggctaa
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