Sinocyclocheilus rhinocerous: 107715725
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Entry
107715725 CDS
T04916
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107715725
Transcription factors [BR:
srx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107715725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107715725
NCBI-ProteinID:
XP_016377429
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MIAKMVSKLTSLQQELLSALLDSGVTKDVLLQALEDLDPSPSAFGVKLDSLQMSPSGSKL
SDTDTKPVFHTLTNGHGKGKLSGDEGSEDGDDYDTPPILKELQSQNTEEAAEQRAEIERI
LAVDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREVLRQFNQASQGSVSNMSDKANQDQVLLFFSEFSQSGQGMGQTGDDAGIEPACKKL
RRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLV
TEVRVYNWFANRRKEEAFRQKLAMDAYSGPTHNLNSLLTHSSPHHPQTSNSPPSKMQGTD
TFIVISRILFDIPIIRVLLPWISVSGGGLPPVSTLTNIHASHHMHQQTPNLIMPLSGVMA
IAQSLNTSQAQTVPVINSVAGSLAALQPVQFSQQLNVSHQQLMQQSPGHMSQQPFMASVS
HSHMYPHKQEPPQYSHSSLFPPAMVVTDANSLNTLSSMSSSKQDAKMISVSGGGLPPVST
LTNIHASHHMHQQTPNLIMPLSGVMAIAQSLNTSQAQTVPVINSVAGSLAALQPVQFSQQ
LNVSHQQLMQQSPGHMSQQPFMASVSHSHMYPHKQEPPQYSHSSRFPPAMVVTDANSLST
LSSMSSSKQCPLQAW
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaaaatggtttctaagttgacatctctgcaacaggagcttctgagcgccttg
ttggactctggagttactaaagatgtgcttctgcaagcgttggaagacctggacccgagc
ccgagcgcttttggagttaaactggacagtctgcagatgtccccctccggctccaaactc
agtgatacggatacaaagccggtgtttcacacgctgaccaatggacacggtaaagggaag
ttatcaggggatgagggctcagaggacggggatgattacgatacaccgccgatactgaaa
gagctgcagtctcaaaatacagaggaagcagcggaacagagggcagaaatcgagcgaatt
ttggcggtggacccgtggcgcgcggcccgcatgatcaaaggctacatgcagcagcacaat
atccctcagcgcgaggtggtggatgtgacaggcctcaatcagtcgcacctgtcgcagcac
ctgaataaaggcacgcctatgaaaacgcagaaacgcgcggcgctctacacctggtacgtc
aggaaacagcgggaggtcttgcgacaattcaaccaggcctcgcaaggctctgtcagcaac
atgtccgataaagccaaccaggatcaggtgctactttttttctccgagttcagtcagtct
gggcagggcatggggcagacaggggacgatgctggaattgaacctgcatgcaagaaattg
agacgcaaccgcttcaaatgggggcctgcgtcccaacagatcctttaccaggcttatgaa
cgacagaagaaccccagcaaagaggagagggaggcactggtggaggagtgcaaccgagct
gaatgcctccagagaggagtatcaccttctaaagctcacgggcttggctccaacctggtc
acggaggtgcgagtctacaactggtttgccaacaggagaaaggaagaggcctttagacaa
aaactggctatggatgcctatagtgggccaacacacaatctgaactcccttcttacacac
agttccccacatcacccacaaaccagcaactccccaccaagtaagatgcaaggtactgac
acattcattgtaatctcacgtatattatttgatattcctattatccgagtgcttctgccg
tggatctcggtatcaggcggaggtcttcctccagtcagcaccctgaccaacatccatgca
tcccaccacatgcaccaacagacccccaacctcataatgcccctttctggagtcatggcc
attgcacaaagtttgaacacatcgcaggcgcagacggtacctgtcatcaacagcgttgca
ggcagtctggcagcattgcagccggtgcagttctcgcagcagctgaatgtctcgcaccag
cagctcatgcaacagtcacccggccacatgagccagcagcccttcatggcctctgtctca
cactcacacatgtacccacacaagcaggagccaccccagtattctcactcgtctctgttt
ccccctgccatggtggtgacagacgccaacagcctcaatacgctgagctcaatgtcctcc
agcaaacaggatgccaagatgatctcggtatcaggcggaggtcttcctccagtcagcacc
ctgaccaacatccatgcatcccaccacatgcaccaacagacccccaacctcataatgccc
ctttctggagtcatggccattgcacaaagtttgaacacatcgcaggcgcagacggtacct
gtcatcaacagcgttgcaggcagtctggcagcattgcagccggtgcagttctcgcagcag
ctgaatgtctcgcaccagcagctcatgcaacagtcacccggccacatgagccagcagccc
ttcatggcctctgtctcacactcacacatgtacccacacaagcaggagccaccccagtat
tctcactcgtctcggtttccccctgccatggtggtgacagacgccaacagcctcagtacg
ctgagctcaatgtcctccagcaaacagtgtccgcttcaggcctggtga
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