Sinocyclocheilus rhinocerous: 107719129
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Entry
107719129 CDS
T04916
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04145
Phagosome
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107719129
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107719129
09144 Cellular community - eukaryotes
04510 Focal adhesion
107719129
09142 Cell motility
04820 Cytoskeleton in muscle cells
107719129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107719129
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107719129
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107719129
Membrane trafficking [BR:
srx04131
]
Endocytosis
Phagocytosis
Opsonins
107719129
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107719129
Exosomal proteins of colorectal cancer cells
107719129
Exosomal proteins of bladder cancer cells
107719129
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107719129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
107719129
NCBI-ProteinID:
XP_016381967
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MLSLEDVKQTVAAVEKISLALKTLSDVYVMSSFRLPPKLGGVLLGLYNKQDNKKYLEVAI
MSKINKVLVRYVREDGKLHTVNLQSPNLADGRSQSVILRVGGLRREYLSLELYVNCRLAD
SAQRLPLLVALPRDAELVEIRNGHKAYTRMQGSVEYLKLALGGTVAQAGALTDCPFQGDA
SSYNIVNGEVNSILGDHTKALIGQLIIFNQILGELREDIREQVKEMSLIRNAILECQMCG
FHEPRSRCQPNPCFKGVGCMETFDFPGYRCGPCPEGMTGNGTHCQDIDECEEAQPCYTPG
TCVNTAKGFTCEPCPPGLWGPPLSGFGVEYAKSHRQECSDFDECLDLANACTPNSICINT
IGSYRCGQCKVGYAGNQTAGCFPRKSCASLSFNPCDFNAHCVIQRNGDVTCACNVGWAGN
GHTCGKDTDIDGYPDRSLPCMDNDKHCKQDNCIFTPNSGQEDADNDGIGDQCDEDADGDG
IKNVEDNCRLVSNKDQQNSDTDSFGDACDNCPTVPNIDQKDTDNNGEGDACDDDIDGDGI
QNVLDNCPKVPNPMQTDRDRDGVGDACDSCPEINNPMQTDVDNDLVGDVCDTNQDTDGDG
HQNTRDNCPDIPNSSQLDSDNDGIGDDCDDDDDNDGVPDNHAINGIGPDNCRLISNPNQK
DSDSNGVGDVCENDFDNDAVMDLIDVCPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVV
LNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQTEQTYWQSIPFRAMAEPGLQLKAVKSRTGPGEFLRNALWHTGDTDGEVKLLWKDPRN
VGWQDKTSYRWQLSHRPQVGYIRVKLYEGTEMVADSNVVIDTTMRGGRLGVFCFSQENII
WSNLRYRCNDTVPEDFSTHHKQVLMYIKV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtttggaggatgtgaagcagaccgtggctgcggtggagaagatctctttagct
ctgaagactctcagtgatgtgtatgtgatgtcttccttccgtctgcctcctaaactgggt
ggagttctgctgggcctctacaacaagcaggataacaagaaatacctggaggtcgccatc
atgagcaagattaacaaagttctggtccggtatgttcgtgaagatgggaagctgcacaca
gtaaacctgcagagcccaaatctggcagacggacggtctcagtctgttattctccgtgtc
ggtggcctgcgcagagagtacctgagcctcgagctctatgtgaactgtcgtctggctgac
tctgcccagcggctgcccttattggtcgctctgcccagagatgcagagctggtggagatt
cgtaatggccacaaggcatacactcggatgcagggttcagtggagtatcttaaactggca
ctagggggcactgttgcccaggctggggctcttaccgactgcccctttcagggggacgcc
tcttcatataacatagtgaacggcgaggttaattctattctaggtgaccacactaaagct
ctgattggccagctgatcatctttaatcagatcttgggagagctgagagaggacatcaga
gaacaggtgaaagaaatgtctctcatcaggaatgctattctggagtgccagatgtgtgga
tttcatgagccgcgttcacgctgtcaacccaacccctgctttaagggcgtgggctgcatg
gagacgttcgatttcccaggctaccgctgtggcccctgtccggagggcatgacggggaac
ggcacacactgtcaggatatagatgagtgtgaagaggctcagccgtgttatacaccaggc
acatgtgtcaacacagcaaaaggtttcacctgtgagccctgcccacccggactgtggggt
cctcctctctctggattcggtgtggaatatgcaaagagtcatcgtcaggaatgctctgat
ttcgatgaatgtcttgatttggccaatgcctgcacacccaactccatctgcatcaacacc
attggatcatatcgatgcggtcagtgcaaggttggttatgctgggaatcagacagctgga
tgtttccctcggaaatcgtgcgcttcgctcagtttcaacccctgtgactttaacgctcac
tgcgtcattcagcggaacggcgacgtcacctgcgcttgtaatgtcggatgggccggtaac
ggtcacacctgtgggaaggacacggatattgatggttatccggatcgctccttgccctgc
atggacaacgacaagcactgcaaacaggacaactgcatcttcacgcccaactctggtcag
gaagatgcagataatgatgggattggagaccagtgtgatgaggatgcagatggagacgga
ataaagaacgtagaggataactgtcggttggtttccaataaagatcagcagaactctgac
actgattcgttcggtgatgcatgtgataactgtcccaccgttcccaacatcgaccagaaa
gacactgacaataacggagagggagatgcttgcgatgacgacatcgatggagacggaatc
cagaatgtgctggataactgtcccaaagtgccgaacccaatgcagacagaccgggacaga
gacggagtgggggatgcgtgtgacagctgtcctgagatcaacaaccccatgcagacagat
gtagacaatgacttagtcggggatgtttgtgacaccaatcaagacactgatggagacgga
caccagaacactcgagataactgccccgacattccaaacagctctcaactggactcggac
aatgacggcatcggagatgactgtgacgatgacgatgataacgacggggtcccggacaat
catgccatcaacggcatcggacccgataactgcagactcatttccaaccccaaccagaaa
gactcagacagtaacggagtcggtgacgtatgtgagaatgactttgacaatgatgcggtg
atggatttgattgacgtgtgtccagaaagtgctgaagtcacacttacagatttcagagcc
tatcagacagtcattctggacccggagggtgacgctcagatcgacccgaactgggtggtg
ctcaatcagggtatggagattgttcaaaccatgaacagcgacccgggcttggctgtgggt
tacacagcgtttaacggtgtggacttcgagggaacttttcacgttaacacagtgactgac
gacgactacgccggcttcatctttggctatcaggattcatcgagtttctatgtggtgatg
tggaagcagaccgaacagacgtactggcagtcgatccccttcagggccatggctgaacct
ggtctgcagctcaaggcagtgaagtctcgtacaggtccaggtgagttccttcgtaatgct
ctgtggcacacgggggatacggatggagaggtgaaactgctctggaaagacccacgaaat
gtcggctggcaagataagacctcgtaccggtggcagctcagccatcggccacaagtcggg
tacatcagggtgaagctgtatgaaggcacagagatggtggctgactccaatgttgtgatt
gacaccaccatgagaggagggcgcctgggcgtgttctgcttctctcaggagaacatcatt
tggtccaatctgcgctaccgctgtaacgatactgttccagaggacttcagtacacaccat
aaacaggttctaatgtacataaaggtgtga
DBGET
integrated database retrieval system
