Sinocyclocheilus rhinocerous: 107726609
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Entry
107726609 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107726609
03016 Transfer RNA biogenesis [BR:
srx03016
]
107726609
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107726609
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107726609
Transfer RNA biogenesis [BR:
srx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107726609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
DUF4882
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
107726609
NCBI-ProteinID:
XP_016391737
UniProt:
A0A673GKQ5
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRSAVKTGGAVFNKWQMNPYDRGSAFAIGPDGLCCQSREFKEWH
GCRSTKAVTKGKYYYEVACHDQGLCRLGWSTAQASLDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDLDKCQVSFSKNGNDLGLAFEIPPQLKNQPFFASCVLKNAELKF
NFGDEPFKNQPKDGYVAVNQASDGHVVKSSQTGSAKVSQVKSISNAPRALIIEPSKELAE
QTLNNVNQFKKYVDNPKLRDLLIIGGVAAKEQLSILESGVDIVVGTPGRLDDLISTGKLD
LSQVRFLVLDECDGLLSAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDDTRPGAS
TPEMWSEAIKILKGEYAIRAIKEHKMDQAIIFCRTKIDCDNMEQYLIKQGGGPDKKGHQF
SCVCLHGDRKPNERKYNLERFKKQEVKFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRTDRMGLAISLVALEKEKVWYHVCPNRGKGCYNTRLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRTAGGGLYKGHVDILAPTVQELASLER
EAQTSFLHLSYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcggcgaaatgggagtgatgcctgaaattgcacaggcggtggaagaaatg
gactggctgttgccaacagacattcaggccgaatccattccactgattctgggcggagga
gacgtgctcatggctgctgagactgggagcggaaaaactggagccttcagtattccagtc
atccaaatagtctatgagacccttaaagaccagcaggaggggaagaagggacgcagtgct
gtaaagacaggaggagcagtttttaataaatggcagatgaacccctatgacagaggttct
gcatttgctattggtccagatggcctgtgctgtcagagcagagagttcaaagagtggcat
ggctgtcgttccaccaaagcagtcacaaaagggaagtattattatgaagtagcctgtcat
gatcaagggctgtgcaggctgggctggtccactgcccaggcatcactggacttgggaacg
gacaaatatggatttggctttgggggaactggaaagaaatctcacaataagcagtttgat
agttacggagaggagttcactatgcacgacaccatcggatgctacatagatctggataaa
tgccaagtgtcattctctaaaaatggtaatgatctgggtctggcttttgagatccctcca
cagctgaaaaaccagcccttctttgcttcctgtgtgctgaagaatgctgaactgaaattc
aactttggtgatgaacctttcaaaaaccaacctaaagatggatacgtggccgtgaaccag
gcttcagacggtcatgtggtcaaatccagccagacaggaagtgctaaagtgagtcaggtc
aaatccatttctaacgcccccagagctctcatcattgagccgtctaaagagctggctgaa
caaaccctcaataatgtcaaccagttcaaaaaatatgttgataaccccaaactgagggat
cttctgatcattggaggagtggctgctaaagaacagctctccattttagaaagcggagtt
gatattgtggttgggaccccaggcagactggatgatctcatatccacaggaaagctggat
ctttcccaagtccgcttcctggtgctggatgagtgtgatggactcctgtcagctggctac
actgacttcatcatgagggtctacaaccagatcccacaggtcacttcagatggcaaaaga
ctccaggtgatagtttgctctgctacactgcactcatttgatgtgaagaagctctcggag
aagatcatgcatttccccacatgggtggatctgaagggagaagattccgttccagaaacg
gtccatcacgtggtggtgccagtcaacccaaaaactgacaggctttgggagagactgggg
aagaaccacattaggactgatgaagttcatgccaaggacgacacacgacctggagccagc
actccagagatgtggtcagaggccattaagattctgaagggagagtatgcgatcagagcc
attaaggagcataagatggatcaggccatcatcttctgcaggacaaagatcgactgtgac
aatatggagcagtacttaatcaaacagggaggaggtccagacaagaaaggacaccagttt
tcttgtgtctgtcttcatggcgacaggaaaccaaatgagcgcaaatataacttggagcga
ttcaagaaacaggaagtgaagtttctgatttgcacagatgtggctgctagaggaatcgat
attcatggtgttccttatgtgataaatgtgactctaccagatgagaagcagaactatgtt
catcgcattggaagagtcggcagaacggacaggatgggtttggctatatcactggttgct
ttggagaaagagaaggtgtggtaccacgtttgtcccaacagaggaaaaggctgctataac
accagactcaaagagaatggaggatgtactatttggtacaacgagaaagagttgttgtca
gaaatcgaggaacatttgaaatgcaccattactcagtgtgaacctgacatcaaagtacct
gtggatgaatttgatggcaaagtgacttatgggcagcgtaggactgcagggggtggtctc
tataagggccatgtggatatactggccccgaccgtacaggaactggccagtctggagaga
gaggcacaaacttccttccttcatctcagctatctacccaaccaactctttaaagctttc
tag
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