Sinocyclocheilus rhinocerous: 107742454
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Entry
107742454 CDS
T04916
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107742454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107742454
NCBI-ProteinID:
XP_016410905
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MLTEANSNQRQIPRTLQEIHDVIIYFISFHFYILLHFIDTREYMKFLYPEIREFNMNSSV
DLSLKKALKTPPTRRTAEDLNTIYTHLFHMDVLCHLREHQLRSMCMTARYERYEANHVLF
YADSISTCWFVLLSGSVLVKEHMYLARCCFGTQRGGRRGCECITLEPSEMIVLPGDLSKM
HLTDHAHQQMHMPPSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAPVDSEEEE
EDEDIERSSEALLGRDLVRECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCR
VMMFEVVEQEGTIILQDKQELDLWYVILNGAVEISYGDGRTEILCMGNSFGISPSLDRQF
MNGVVCTKGDDCQFVCIAQEDYCRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGH
IVIKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRETV
TRIVLLWVNNHFNDFEGDPVMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQITLQ
KPSRESPLFFTVQGGSERSFGIFVETVEEASKAAEAGLKRGDQIMEINGQNFENISYSKA
MDILKNNTHLSLTVKTNIFVFKELQSRVRNEKKNGGPHIPKIQERKSNRFSIPDLPGDLE
FPSDSKSRKKMKANTVSGGRNKIRKMLEKTRFSILPPKPFSDGGMSQSQDDSIVGTKQCR
HSVAIMPIPGSLSSSSPDLLQPAASALDFSNPSVAGFYYIPDQVIRVFKADQQSCYIIIS
KDTTAKDVVSHVVSEFGLIAAPETYSLCEVSVSPEGVIKQRRLPDQLSKLADRIQLNGRY
YLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVAAQLSMRDFGLFRNIESTEYVDDL
FKRDPGGGGSSHLKQFEEVINQETFWVATELLREPNALKRMKTIKHFIKIALHCRECKNF
NSMFAIIRDILSNDSSVDGLVNFEKLRMIAKEIRNVVRMTSANMDPALMFRQRKKRWKSL
GSLSQGSTNSNLLDVQGSHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVETDEEKF
QIMSLQCEAAYSTLSKNLSERRSTKSDMSPVSVRSGVSSAKPQNRVSQVLQVPPVSLYPL
RKKSIAKDLSASFGPNSPQMLKKAAGAAEDTATVSCLHSSPTVSPQGSPRKVGGAPRQNC
GQLNLSGSSSSLASEVGVRTTGGRSYGIGYALLPAVRSDLSDSSEISSRSSIVSNGSVDS
MPTAPTVSVPSETPANTPANCSQPGTSSSSAQHLVVRETSFTFSSSAEELTVPEQTSISE
LADSGRGSWTSCSSNSHDNLQTLSGQRALDLLNHRHTPMGGPIAEVEIGPGLPEDSCSRD
GSELSQSRQSWTSSSSLSDTYEGSYGTIKRKTQDQQSTDASYKTITSSTEKGLIVYCVTS
PCKDDRLKAPPPTPPGYQGLTLGDAQDRGASRPTHVKPPEYSVALQRCKLRHSLAEPNLS
RPPSVTLHSHADSEEDEQVSAV
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaagctaactcaaatcagcgccagattccccggactctgcaagagattcat
gatgtcattatttattttatttcatttcacttttatattttacttcattttatcgacaca
cgtgaatatatgaagtttttatatcccgaaatcagagagtttaatatgaattcctcagtg
gatttatcgctgaagaaagcgctgaaaactcctccgacacgacgaactgctgaggaccta
aacaccatctacactcatctgtttcacatggatgtgctgtgtcacctcagagaacatcag
ctcaggtccatgtgcatgacagccaggtacgagcgctatgaggctaaccatgttctcttc
tatgctgacagcatctccacgtgctggtttgtcctgctttcgggctcagtgctggtcaag
gagcacatgtatctggcgcgatgctgtttcgggacgcagcgtggaggaagacgaggctgt
gaatgcatcactttagagccgtctgagatgattgtgcttcctggtgacctcagcaagatg
cacctgacagaccacgcccaccagcagatgcacatgcctcccagccaatcaggatgcagc
atcgccagtgactcggggagcagcagcctatcagacatctaccaggccaccgagagcgag
atgggtgacgtggatctgtccggcctccccgaagctcctgtggactctgaggaagaggag
gaggatgaagatatcgagcgctcctcggaggctcttctgggcagagatctagtgcgagag
tgtctagagaaggatgcggtggatcggaccgatgacgacatcgagcagctcctggagttc
atgcaccagctgccggcattcgctaacatgaccatgtccgtcaggagggagctgtgtcgg
gtcatgatgttcgaggtggtggaacaggaaggcaccatcattcttcaggacaaacaggag
ctggacctgtggtacgtgatcctgaatggtgctgtagagatcagctatggagacggccga
acagagatcctgtgcatgggcaacagcttcggaatctcaccatctctagacagacagttc
atgaacggggttgtgtgcactaaaggagatgactgccagtttgtgtgcatcgcacaagag
gactactgccgcatcctcaaccatgtggagaagaacacacacaaggtggaggaggagggc
gagatcgtcatggtgaaggagcacagagagctggaccgcagcggcaccaggaagggccac
atcgtcattaagggcactcctgagcgtctgatcatgcacctggtggaggagccgtcagtg
gtggatcccacttacattgaggacttcctcctgacgtaccgcacattcctgtccagcccc
atggaagtgggcaagaaacttctggaatggttcaaagtggacagtctcagagagacggtg
acgagaatcgtgttgttgtgggtaaacaatcatttcaacgactttgaaggcgatccggtc
atgactcagttcctggaggactttgagaagttgctggactcctcgaaaatgaagggtcat
ctgcgtctgctgaacatcgcgtgtgctgctaaagccaagtgtcgtcagatcacgctgcag
aagccatccagagagtctccgctgttcttcacggttcagggcggcagtgagcgcagcttc
ggcattttcgtggagactgtggaggaggccagtaaagctgcagaagcagggctcaagcgt
ggagatcagatcatggagatcaatgggcagaactttgagaacatctcgtactccaaagcc
atggatatcttgaagaacaacacacacctctctcttactgtgaagaccaacatcttcgtt
ttcaaagagcttcagagccgcgtgaggaacgagaagaagaacggtggtcctcacatccct
aagattcaggagaggaagagcaaccgcttctccatcccggatctgcccggtgacttggag
tttccctcggacagcaagagccgcaagaagatgaaggccaacacagtgtctggaggacgc
aacaagatccgtaagatgttggagaagaccagattcagcatcctgcctccaaagcccttc
agtgacggtggcatgtctcagtctcaggacgacagtatcgtgggcactaagcagtgccgg
cacagtgtggccataatgcccatcccgggcagcctgtcatccagcagtcctgacctgctt
cagcccgccgccagcgctctggacttttccaacccttcagtggctggtttctactacatt
ccagatcaggtgatccgcgtgttcaaggccgaccagcagagctgctatatcatcatcagt
aaagacaccacagccaaagatgtcgtctcgcatgtggtcagcgagttcggcctaatcgcc
gctccagagacctactcgctgtgtgaggtttccgttagtcctgaaggagtcatcaaacag
cgccgactgcccgaccagctctcaaaactagcggaccgcatccagctcaatggcaggtac
tacctgaagaacaacatggagacagagacgctttgctctgatgaagacgctcaggagctc
ttgagggagagtcagatcagtctcctgcagcttagcacagtggaggtggctgcgcagctc
tccatgagagactttggcctgttccgtaacatcgagtccaccgagtatgtggatgacctg
tttaagcgggaccccggcggtggaggcagcagccacctgaagcagtttgaggaggtcatc
aaccaggagaccttctgggtggccactgagcttttgcgcgagcccaacgcactcaaacgc
atgaagaccatcaagcactttatcaagatcgccctgcactgccgcgagtgcaagaacttc
aactccatgtttgccatcattagagatattttaagtaacgattcgagtgttgacggcctg
gtgaatttcgaaaagttacgaatgatcgccaaggagatacgaaatgtggtgcgcatgacg
tcagccaacatggacccagcgctcatgttcagacagaggaagaagaggtggaagagttta
gggtctctgagtcagggcagcaccaactcgaacctgctggacgttcagggcagtcacaag
aagcgcgtgcggcgcagctctctgctcaacgccaagaagctgtacgaggacgcacagatg
gcacgtaaggtgaagcagtacctggcacacctggaggtggagacggacgaggagaagttc
cagatcatgtcgctgcagtgtgaagcggcctacagcacactgtctaagaacctgagcgag
cggcggtccactaaatcagacatgtccccggtgtccgtgcgctccggtgtgtcttcagcc
aagcctcagaaccgcgtctcccaggtgctgcaggtgcctcccgtcagcctgtaccctctg
cgcaagaagagcatcgccaaagacctgtccgcatccttcggtcccaactcacctcagatg
ctgaagaaagcagctggtgcggccgaagacacggccaccgtctcgtgtctgcactccagt
cctaccgtctccccacagggatctcctcgcaaagtgggcggagctcccagacagaactgc
ggtcagctgaacctgtcgggttcgtcctcgtctctagccagtgaggtcggcgtcaggacc
acaggcggacgctcgtatggcataggttacgcactcttgcccgccgtcaggtccgacctg
tctgactccagcgagatctcctcgcgctccagcatcgtcagtaacggctccgtggactcc
atgcccacagcgcccaccgtcagcgtcccgtcagagacgcccgcaaacactccagccaac
tgcagtcagcccggcacgagttcatcttcagctcaacaccttgtcgtgagggagaccagc
ttcacgttctccagcagtgcggaggagctgacggttcccgagcaaacctccatctctgag
ctggccgacagcggccgcgggagctggacctcctgctctagtaactcccacgacaacctc
cagactctttcaggccagcgagctctggacctgctcaaccatcgccacacgcccatgggc
ggcccgatcgccgaggtggagatcggcccgggtttgccagaggacagctgctccagagac
ggatctgagctcagtcagtccagacagagctggacgtcctccagttccctgtcggacacc
tacgagggcagctacggcaccatcaaacgcaagacgcaagatcagcaaagcacagacgct
tcgtacaagacgatcacgtccagcacggagaagggactcatagtgtactgtgtaacgtca
ccctgcaaagatgataggctcaaagcgccgcccccgactccgccgggctaccagggcctg
acgctgggcgacgcgcaggacagaggagcctcgcggccgacccacgtaaagccgcccgag
tatagcgtggccttgcagaggtgcaagctgcgacacagtctcgccgagcccaacctgtcc
agaccacccagtgttactctccattctcacgctgatagtgaggaggatgagcaggtttct
gctgtttga
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