KEGG   Sinocyclocheilus rhinocerous: 107744318
Entry
107744318         CDS       T04916                                 
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
  KO
K07532  Rho guanine nucleotide exchange factor 12
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04270  Vascular smooth muscle contraction
srx04625  C-type lectin receptor signaling pathway
srx04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:srx00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107744318
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    107744318
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    107744318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:srx04131]
    107744318
Membrane trafficking [BR:srx04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    107744318
SSDB
Motif
Pfam: RGS-like PH_16 RhoGEF PDZ PDZ_6 PDZ_2 APAF1_C DUF5497
Other DBs
NCBI-GeneID: 107744318
NCBI-ProteinID: XP_016413374
LinkDB
Position
Unknown
AA seq 1455 aa
MSKTLIIFACHASTLSHDCGIPSACQSCERFPKKASRTGSILSKDHPPDKKPKSDKASVP
SSHEFDPTGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPI
GPDRSSSSPSPSERKPTPLPVWAMTEEHSRNPTTKLLKEIQDAKKHIPQHQEQLSKPTET
GQDGSLSPRPREGEQEDGGGDLDRPPSWQGDAEMVPPWTNNTITPVTPSPVPESPCQRET
PCHSPKTTPRDSLNSCPSPDAEDTPDLDSQSSVGSPSSRPVAHIIGAEDEDFNTEQEQMN
GQCSCFQSIDLLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTF
FIDKTASLKVTVPESIIADLERNAHSINAERKRPEPISEDIHRQYVQQLQDTLLPDIQKN
LEDFRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEED
KCSTMQFVILSYMKQLGVKGKESRGLEHKPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFS
SVFPQRRPSRIDASSLSKALEPRQRPTKPQLPLSAGEQADGSSPPVRGSQSSEGSDGTTA
LVTLPPYSIPAAQGTDGISRESETGGPPSSALPRLGDGVIPGDSQDSSSSNTHFDFSPCT
LEHLQEEEAETEKTQDTGTPRSDKSRMEPLGSGEVQSEDDQCVEVELEPPNWQTLVSRDV
LSTLTPQEIKRQEVINELFYTERAHVRMMKVLENVFYQPLIREAILPPADIKNIFSNLEE
IVQLHVSLTEQITAVRKKNETALIDSIGDDLLSWFSEEEEAKIKRAAGTYCSNQPFALEL
IKSKQKKDQRFNSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEER
SKVKQAGECCRNILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTK
RKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFS
PIIKLSTVMVRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTK
LQNIIPLPQTDGEREAVELMNSGVQKLNKDSEPISLVNIQSPEKDGTEVMPTLPCSTNPF
ETKSDEEEDEEEENSLQDQAEDEEAFVVAEMTDRLTFLKQRSRLGIAIDEDEAFELQPLR
ADEALRTLATLRQLLINHMSSQEDRDSERREQQEDAARTGSQQRSEDSTAISSTVENGSE
RGENRGENAQELPSGDTGFFETSEDCVSAGSYMVLEVYGGSGESSTDDDVQGSSGEPVAG
GDSGIDLKKLLSSSSQSSGGPNLNRRIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETA
TDTEENKDKSFMSVY
NT seq 4368 nt   +upstreamnt  +downstreamnt
atgagcaagactttgatcatctttgcgtgtcatgcttcaactttgtctcatgattgtggt
attccctcagcgtgccagtcttgtgaaaggtttcccaaaaaagcgagcaggacaggaagt
attctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaaggcgtcagtcccc
tcctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaagat
gagaatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgtaaaa
gaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtcaat
gggacattagttacacactcaaatcatgtagaagttgtaaagctaataaaatcgggctcc
tatgtggccctaacagtgctggggagaccgccgggtttgcctcagatccccctttcagac
ggcgagggggaggaggggcctctcttctcgctcacctcccctcactccccggggcccatc
ggtccagaccgctcgtcttcctcccccagcccctcggagcgcaaaccgacccctctgcct
gtatgggccatgacggaggagcacagcaggaaccctacaactaaactactgaaggaaatc
caggacgccaagaagcacattccacagcaccaggagcagctcagcaagcccactgagact
ggacaggatggctccttatctccaaggccacgagaaggagagcaggaggatggaggggga
gatttggatcggcccccttcctggcagggcgatgctgaaatggtgccaccatggaccaac
aataccataacccctgtcactcccagtcctgtcccagagagcccatgccaaagagagacc
ccctgccacagcccaaagaccacaccccgagacagcctcaactcctgtccttcaccagac
gctgaagacacacctgaccttgattctcagtcgagtgtggggagcccctcctctcgtccg
gtagcacacatcattggtgctgaggatgaagactttaacacagagcaggaacagatgaat
ggacagtgtagctgttttcagagcatagacctcctgaaatctcggcctgctcacctggca
gctttcatccatcacgtggtctctcagtttgaccctgcgccactgctgtgctacctctat
gctgaactttacaaacagaccagctccaaagagacacggcgaatcctcatggataccttc
ttcatagacaaaacagctagcttgaaagtaacagtgcccgaatccatcatcgctgacctg
gaacggaatgcacactcaattaatgcggaacggaagaggccggagcccatctcagaggac
atccaccgacagtatgtgcagcagctgcaggacacacttctacctgacatccagaagaac
ctagaagacttcaggcacaagcgcagtatgggtttgaccctggctgaagcggagctagcc
cgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgtgca
gagcacatcatctctaagatagaagatgtactattgacgtcacaggccacagaggaagat
aagtgtagcaccatgcagtttgtgatactgtcgtatatgaagcagctcggtgtaaaaggg
aaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagataaag
aaaagtataaagccagagaaagatggaagcgaggagaaatcgaagaaaacaagattttct
agtgtctttcctcagagacggccgagcaggattgatgcttcatcactcagcaaggctctg
gaaccgaggcagcgtccgacaaagcctcagctgccattgagcgctggagagcaggcagac
gggtcgtctcctcccgtacggggcagtcagtccagtgagggctcagatggcaccactgcc
ctggtcacgttacccccttacagcattccagcagcacagggcacagacggcatcagccga
gagtcggagactggtggacctccttcttctgcacttcccagactgggagacggtgtcatc
cctggagattcgcaggactcgtcctcttcaaacactcactttgacttcagcccctgtaca
ctggagcatctacaggaggaggaagctgagacagaaaagacgcaggacaccggcaccccc
aggtctgacaagagcaggatggagccgctgggctctggagaggtgcagagtgaagatgat
cagtgtgttgaggtggagctagagcctccaaactggcagacgctggtgagcagagacgtc
ctgtccacacttacccctcaggaaatcaagagacaggaagtcatcaacgagttgttctac
acggagagagcacacgttcgaatgatgaaggttctggaaaatgtgttttaccagccgctg
atcagagaggccatcctgcctcctgcagacatcaaaaacatcttcagcaaccttgaggag
atcgttcagctgcacgtgtctttaacggaacaaattactgcagttcggaagaaaaatgag
actgcgctcattgactcaataggagatgatctgctttcctggttcagtgaggaagaggag
gcaaagatcaagagagctgcaggcacgtactgcagtaatcagcctttcgccctggaactc
atcaagagcaaacagaagaaagaccagcgcttcaactccttcatacaggaggcagagagt
aaccgtcattgtcgcaggctgcagttgaaggacattattcctgtggagactcaaagactc
acaaagtatcccctcctgctggagaacatcgccaaatacacagaggatcctgaggagaga
agtaaagtgaaacaggctggcgaatgctgtcgaaatattctcactcacgtcaaccaggag
gtgaaggaggccgagaacaaacagaggttggaggactaccagagacgactggatctgtcc
tcactgaaacagagcgagaaccccatgatcgccgagtttaagaacctggacttgactaag
aggaagatggtgcatgagggaccgctgtcttggaaggtcaacaaagataaaactattgag
ctgtacacattgctgctggaggatatattggtgctacttcaaaggcaagatgagaagcta
atcttaaaatgccacagtaagaatctggcgggcaccgctgagaccaaacacatcttcagc
cccatcatcaaactcagcaccgtgatggtgcgctccgtcgccaccgacaacaggtcattc
tttgttctctctatgtctgataatggagcccagatctatgaactaatggcccagaccgta
tctgagcaaaagacgtggcagtgtctgataacacaaagagcagactgcatgaagaccaaa
ctacagaacatcattccattacctcagactgatggggaacgtgaagcggtcgagttgatg
aactctggtgttcagaaactaaacaaagactctgagcccatttctttagtgaacattcag
tctccagaaaaagatggcactgaggtcatgccaaccctgccatgtagcaccaacccattt
gagaccaaatctgatgaggaggaggatgaagaagaagaaaattcactacaggatcaagct
gaagatgaggaagcgttcgtggtggccgaaatgaccgatcgactgacattcctgaagcag
cgctcgaggctgggcatcgccatagatgaggacgaggcctttgagctccagccactcaga
gccgatgaagctctcagaacactggcaacactgaggcagctcctgatcaaccacatgtcc
agtcaggaggacagagatagcgaaagacgagagcaacaggaagatgcagcgaggacgggc
tctcagcagaggtcagaggacagcactgcgatcagctccactgttgagaacggctcagag
aggggcgagaacagaggggagaacgcacaggaactgccctccggagacacaggcttcttt
gagacgtctgaggattgtgtctcagcaggcagttacatggttttggaggtgtatggcggc
tcaggcgagagcagcacagatgatgacgtgcagggcagcagcggggagccagtggccggg
ggagactcaggcattgacttgaagaagctcctctcttcctcctctcagagcagcggagga
ccaaacctcaacagacggatcatgacacacatacgtctactacaggccaacctgcagcat
ctgaaggatacagagatcaagtataatcagctacgccaaaggctatcagaggaaacagct
actgacacagaggaaaacaaagataaaagtttcatgtctgtttattga

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