Sinocyclocheilus rhinocerous: 107744318
Help
Entry
107744318 CDS
T04916
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04270
Vascular smooth muscle contraction
srx04625
C-type lectin receptor signaling pathway
srx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107744318
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107744318
09153 Circulatory system
04270 Vascular smooth muscle contraction
107744318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107744318
Membrane trafficking [BR:
srx04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107744318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
APAF1_C
DUF5497
Motif
Other DBs
NCBI-GeneID:
107744318
NCBI-ProteinID:
XP_016413374
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MSKTLIIFACHASTLSHDCGIPSACQSCERFPKKASRTGSILSKDHPPDKKPKSDKASVP
SSHEFDPTGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPI
GPDRSSSSPSPSERKPTPLPVWAMTEEHSRNPTTKLLKEIQDAKKHIPQHQEQLSKPTET
GQDGSLSPRPREGEQEDGGGDLDRPPSWQGDAEMVPPWTNNTITPVTPSPVPESPCQRET
PCHSPKTTPRDSLNSCPSPDAEDTPDLDSQSSVGSPSSRPVAHIIGAEDEDFNTEQEQMN
GQCSCFQSIDLLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTF
FIDKTASLKVTVPESIIADLERNAHSINAERKRPEPISEDIHRQYVQQLQDTLLPDIQKN
LEDFRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEED
KCSTMQFVILSYMKQLGVKGKESRGLEHKPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFS
SVFPQRRPSRIDASSLSKALEPRQRPTKPQLPLSAGEQADGSSPPVRGSQSSEGSDGTTA
LVTLPPYSIPAAQGTDGISRESETGGPPSSALPRLGDGVIPGDSQDSSSSNTHFDFSPCT
LEHLQEEEAETEKTQDTGTPRSDKSRMEPLGSGEVQSEDDQCVEVELEPPNWQTLVSRDV
LSTLTPQEIKRQEVINELFYTERAHVRMMKVLENVFYQPLIREAILPPADIKNIFSNLEE
IVQLHVSLTEQITAVRKKNETALIDSIGDDLLSWFSEEEEAKIKRAAGTYCSNQPFALEL
IKSKQKKDQRFNSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEER
SKVKQAGECCRNILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTK
RKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFS
PIIKLSTVMVRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTK
LQNIIPLPQTDGEREAVELMNSGVQKLNKDSEPISLVNIQSPEKDGTEVMPTLPCSTNPF
ETKSDEEEDEEEENSLQDQAEDEEAFVVAEMTDRLTFLKQRSRLGIAIDEDEAFELQPLR
ADEALRTLATLRQLLINHMSSQEDRDSERREQQEDAARTGSQQRSEDSTAISSTVENGSE
RGENRGENAQELPSGDTGFFETSEDCVSAGSYMVLEVYGGSGESSTDDDVQGSSGEPVAG
GDSGIDLKKLLSSSSQSSGGPNLNRRIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETA
TDTEENKDKSFMSVY
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagactttgatcatctttgcgtgtcatgcttcaactttgtctcatgattgtggt
attccctcagcgtgccagtcttgtgaaaggtttcccaaaaaagcgagcaggacaggaagt
attctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaaggcgtcagtcccc
tcctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaagat
gagaatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgtaaaa
gaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtcaat
gggacattagttacacactcaaatcatgtagaagttgtaaagctaataaaatcgggctcc
tatgtggccctaacagtgctggggagaccgccgggtttgcctcagatccccctttcagac
ggcgagggggaggaggggcctctcttctcgctcacctcccctcactccccggggcccatc
ggtccagaccgctcgtcttcctcccccagcccctcggagcgcaaaccgacccctctgcct
gtatgggccatgacggaggagcacagcaggaaccctacaactaaactactgaaggaaatc
caggacgccaagaagcacattccacagcaccaggagcagctcagcaagcccactgagact
ggacaggatggctccttatctccaaggccacgagaaggagagcaggaggatggaggggga
gatttggatcggcccccttcctggcagggcgatgctgaaatggtgccaccatggaccaac
aataccataacccctgtcactcccagtcctgtcccagagagcccatgccaaagagagacc
ccctgccacagcccaaagaccacaccccgagacagcctcaactcctgtccttcaccagac
gctgaagacacacctgaccttgattctcagtcgagtgtggggagcccctcctctcgtccg
gtagcacacatcattggtgctgaggatgaagactttaacacagagcaggaacagatgaat
ggacagtgtagctgttttcagagcatagacctcctgaaatctcggcctgctcacctggca
gctttcatccatcacgtggtctctcagtttgaccctgcgccactgctgtgctacctctat
gctgaactttacaaacagaccagctccaaagagacacggcgaatcctcatggataccttc
ttcatagacaaaacagctagcttgaaagtaacagtgcccgaatccatcatcgctgacctg
gaacggaatgcacactcaattaatgcggaacggaagaggccggagcccatctcagaggac
atccaccgacagtatgtgcagcagctgcaggacacacttctacctgacatccagaagaac
ctagaagacttcaggcacaagcgcagtatgggtttgaccctggctgaagcggagctagcc
cgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgtgca
gagcacatcatctctaagatagaagatgtactattgacgtcacaggccacagaggaagat
aagtgtagcaccatgcagtttgtgatactgtcgtatatgaagcagctcggtgtaaaaggg
aaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagataaag
aaaagtataaagccagagaaagatggaagcgaggagaaatcgaagaaaacaagattttct
agtgtctttcctcagagacggccgagcaggattgatgcttcatcactcagcaaggctctg
gaaccgaggcagcgtccgacaaagcctcagctgccattgagcgctggagagcaggcagac
gggtcgtctcctcccgtacggggcagtcagtccagtgagggctcagatggcaccactgcc
ctggtcacgttacccccttacagcattccagcagcacagggcacagacggcatcagccga
gagtcggagactggtggacctccttcttctgcacttcccagactgggagacggtgtcatc
cctggagattcgcaggactcgtcctcttcaaacactcactttgacttcagcccctgtaca
ctggagcatctacaggaggaggaagctgagacagaaaagacgcaggacaccggcaccccc
aggtctgacaagagcaggatggagccgctgggctctggagaggtgcagagtgaagatgat
cagtgtgttgaggtggagctagagcctccaaactggcagacgctggtgagcagagacgtc
ctgtccacacttacccctcaggaaatcaagagacaggaagtcatcaacgagttgttctac
acggagagagcacacgttcgaatgatgaaggttctggaaaatgtgttttaccagccgctg
atcagagaggccatcctgcctcctgcagacatcaaaaacatcttcagcaaccttgaggag
atcgttcagctgcacgtgtctttaacggaacaaattactgcagttcggaagaaaaatgag
actgcgctcattgactcaataggagatgatctgctttcctggttcagtgaggaagaggag
gcaaagatcaagagagctgcaggcacgtactgcagtaatcagcctttcgccctggaactc
atcaagagcaaacagaagaaagaccagcgcttcaactccttcatacaggaggcagagagt
aaccgtcattgtcgcaggctgcagttgaaggacattattcctgtggagactcaaagactc
acaaagtatcccctcctgctggagaacatcgccaaatacacagaggatcctgaggagaga
agtaaagtgaaacaggctggcgaatgctgtcgaaatattctcactcacgtcaaccaggag
gtgaaggaggccgagaacaaacagaggttggaggactaccagagacgactggatctgtcc
tcactgaaacagagcgagaaccccatgatcgccgagtttaagaacctggacttgactaag
aggaagatggtgcatgagggaccgctgtcttggaaggtcaacaaagataaaactattgag
ctgtacacattgctgctggaggatatattggtgctacttcaaaggcaagatgagaagcta
atcttaaaatgccacagtaagaatctggcgggcaccgctgagaccaaacacatcttcagc
cccatcatcaaactcagcaccgtgatggtgcgctccgtcgccaccgacaacaggtcattc
tttgttctctctatgtctgataatggagcccagatctatgaactaatggcccagaccgta
tctgagcaaaagacgtggcagtgtctgataacacaaagagcagactgcatgaagaccaaa
ctacagaacatcattccattacctcagactgatggggaacgtgaagcggtcgagttgatg
aactctggtgttcagaaactaaacaaagactctgagcccatttctttagtgaacattcag
tctccagaaaaagatggcactgaggtcatgccaaccctgccatgtagcaccaacccattt
gagaccaaatctgatgaggaggaggatgaagaagaagaaaattcactacaggatcaagct
gaagatgaggaagcgttcgtggtggccgaaatgaccgatcgactgacattcctgaagcag
cgctcgaggctgggcatcgccatagatgaggacgaggcctttgagctccagccactcaga
gccgatgaagctctcagaacactggcaacactgaggcagctcctgatcaaccacatgtcc
agtcaggaggacagagatagcgaaagacgagagcaacaggaagatgcagcgaggacgggc
tctcagcagaggtcagaggacagcactgcgatcagctccactgttgagaacggctcagag
aggggcgagaacagaggggagaacgcacaggaactgccctccggagacacaggcttcttt
gagacgtctgaggattgtgtctcagcaggcagttacatggttttggaggtgtatggcggc
tcaggcgagagcagcacagatgatgacgtgcagggcagcagcggggagccagtggccggg
ggagactcaggcattgacttgaagaagctcctctcttcctcctctcagagcagcggagga
ccaaacctcaacagacggatcatgacacacatacgtctactacaggccaacctgcagcat
ctgaaggatacagagatcaagtataatcagctacgccaaaggctatcagaggaaacagct
actgacacagaggaaaacaaagataaaagtttcatgtctgtttattga
DBGET
integrated database retrieval system