Sinocyclocheilus rhinocerous: 107747518
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Entry
107747518 CDS
T04916
Symbol
pde12
Name
(RefSeq) 2',5'-phosphodiesterase 12
KO
K19612
2',5'-phosphodiesterase [EC:
3.1.13.4
3.1.4.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107747518 (pde12)
03029 Mitochondrial biogenesis [BR:
srx03029
]
107747518 (pde12)
Enzymes [BR:
srx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107747518 (pde12)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107747518 (pde12)
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
107747518 (pde12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDE12-like_N
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
107747518
NCBI-ProteinID:
XP_016417554
UniProt:
A0A673NBM2
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MFLFSALMLNRLSLSTKLFFSYIPPSSILTHRNLFSARFNTNMERCVVRCVPRESKLTIS
FNLDGSNKQMLREQTEPLGKALARIANSLIKAQNKAKKSKPNEGKSETPEAREPEISLRV
NETRVPEDTVNARAWQDGAVLHVGGLKYKVQLNPPTFTVCELPTSLMAGFPVCPKLEMEF
GELRDSEFRWFKESSPKAHMSGEQDCWMEAGCERVFTPSNLDIGLRVMFKCTPGNGSRFG
EPKELVSSGVVEAGPGACSFDNRHMFTQEATDESSLRVVSYNILADIYAQTELSKTVLYP
YCAPYALEMDYRQNLIKKELSGYNADIVCLQEVDKGAFVDSLSPALDAFGLEGVFRIKER
QHEGLATYFRRSKLKLLQQYDVMLSEALMADALHRELLEKVCSNPSLKEKIESRSTMLQV
TVLQSLCDPSRILCVGNTHLYWHPKGGNVRLVQIAVALKHMKQMVTEKHPGAGLIFSGDF
NSTPSSGLFQLVCEGSVSENHDDWASNGPEEQIQVGLMNPFQLASACGVPAFTNYVGGFQ
GCLDYIFVEPHVLQVEQVIPLPSLQEVTTCVALPSVSHPSDHIALVCDLKWK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcttctccgcgctcatgttgaaccgactgtcactctcaactaaactatttttc
agttacatccccccttcttcaatcctaacccacagaaacctcttcagcgcccggtttaat
acgaatatggagagatgtgtggtgagatgtgtgccgcgcgagtccaaactgaccatctcg
ttcaatctggacggcagcaataaacagatgctgagagagcagacggagccgctggggaaa
gccctggctcgcatagccaacagcctcatcaaggcacaaaacaaagcgaagaaatccaaa
ccgaacgaaggaaagagcgagactccagaagcgcgtgaaccagagatcagcctgcgcgtg
aacgagacgcgcgtgcccgaggacaccgtgaacgcgcgcgcgtggcaggacggagctgtg
ctgcatgtggggggcttgaagtataaagtgcagctgaatcctccgacattcactgtgtgt
gagctcccgacatctctaatggccggatttccggtttgtcccaagctggagatggagttc
ggagagctgagggactctgagttcagatggttcaaggaaagctctcctaaagcacatatg
agtggagagcaagactgctggatggaggctggatgtgaacgtgtgttcacgccatccaat
ctggacatcggtttgagggtgatgttcaaatgcacacctgggaacggatccaggtttggg
gaacctaaggaactggtatcttcaggtgtagtcgaagccggtccaggagcatgcagcttt
gataacagacacatgttcactcaggaggccacagatgagtcttcactgagggttgtgtct
tataacatcctagctgacatctacgctcaaaccgagctttccaaaacagtcctgtaccct
tattgtgcgccgtacgctttagaaatggactacaggcagaatctgatcaagaaggagctg
tcggggtacaacgcggacatcgtttgcctccaggaggtggataaaggcgcttttgtcgat
agtttatctcctgcgttggatgcgtttgggttggaaggggttttcaggatcaaggaaagg
cagcacgaaggtctggccacgtattttaggaggtctaagctgaagttgctccagcagtat
gatgtgatgctgagcgaggctctgatggcagatgctcttcatcgggagctgctggagaag
gtgtgcagcaatcccagcttgaaggagaagatcgaaagcaggtcaacgatgctgcaggtg
accgtcttgcagtcgttatgtgacccgtcaaggatattatgtgtgggaaacacacacctg
tactggcaccctaaagggggaaacgttcgactggttcagattgcagtggccctcaaacac
atgaagcagatggtgacggagaagcatcccggagccggactcatattctcgggtgatttc
aacagcacgccctcctccggtctcttccagctcgtctgtgagggatccgtctcggagaat
catgacgactgggcctctaatggaccagaagagcagatccaggtgggactgatgaacccg
ttccagctggccagtgcttgtggggtcccagctttcaccaactacgtcggaggcttccag
gggtgtctggactatatttttgtggagccgcatgtgctgcaggtggagcaggtgattcct
ctgcccagccttcaggaggtcacgacctgcgtggccctgccgagcgtctcgcacccgtca
gatcacatcgcgctggtgtgtgacctcaagtggaagtga
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