Sinocyclocheilus rhinocerous: 107750234
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Entry
107750234 CDS
T04916
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107750234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107750234
03016 Transfer RNA biogenesis [BR:
srx03016
]
107750234
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107750234
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107750234
Transfer RNA biogenesis [BR:
srx03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107750234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
107750234
NCBI-ProteinID:
XP_016421013
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSKDDCQFGSLHEEIKDFYEYISPRPEEEHMRLEVVARIHRVIKDLWPNAEVQVFGSFST
GLYLPTSDIDLVVFGHWETLPLWTLEEALRKRKIADENSVKVLDKATVPIIKLTDLHTEV
KVDISFNVQNGVKAANLIKDFKQQFPVLPYLVLVLKQFLLQRELNEVFTGGIGSYSLFLM
VVSFLQLHYREDVCSSNPNLGVLLIEFFELYGRHFNYLKTGIRIKDGGSYLAKDEVQKGM
LDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKEAFDYAYVVLSHAVSPIAKHYPNNKSES
ILGRIIRVTQEVSEYRDWISAQWGQRSNNDPVLNCNANDVTRLVESEGLDEYNNNFPEDS
AVLPAVPRSKVSSNSSSPSPSSPSSPSSSSPSSTAYSSSDADSDGTPCKTSKALGRGSNS
YSENIERNLSNHRSQNHSATMATPTNKGNKSRQLANKSAQGPHNNPNKIQQNSKSQKLNM
KKRKPQREVAHDDFCR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggacgactgccagtttggcagcctgcatgaggagataaaggacttttatgag
tatatttctcctcgtccagaggaggagcacatgaggctagaggtggtggccaggatccac
agagtcatcaaggacttgtggcccaatgccgaggttcaagtgtttggcagctttagcaca
ggcttgtatttacctacaagtgatatagacttggtggtttttggtcactgggagacttta
cctctctggactctggaagaggcgctgcgcaagagaaaaattgcagatgagaactctgtc
aaagtcctggacaaagcaacggtccccattattaaactgacagacttgcacacagaggta
aaagtggacatcagctttaacgtacagaatggtgttaaagctgcaaacctcatcaaggac
ttcaaacagcaatttcctgtattaccgtacctggtgctggttttgaagcagtttttactg
cagagagagctgaatgaggtttttacgggaggaatcggatcatacagtctgttcctcatg
gttgtcagcttcttacagctgcactacagagaggacgtgtgtagttcaaacccaaacctc
ggtgtactgttgatcgagttttttgagctgtacggacggcattttaactacctgaagacg
gggatcaggatcaaagacggtggctcgtacttggccaaggatgaagtgcagaaaggcatg
ctggatgggtacagaccctctatgctttacattgaggatcctttgcagccaggaaatgat
gtagggcgaagttcatatggggcgatgcaggtgaaagaggcttttgattacgcttacgtt
gtcttaagtcacgctgtgtccccaattgccaagcactaccccaacaacaagtctgagagt
attctaggtcgtataatccgtgtcacacaagaagtatcagagtaccgtgactggatcagt
gcgcagtggggccagcggagcaacaatgatccggtcctcaattgtaatgctaatgatgtc
acacggctagttgagtctgaggggcttgatgagtataataataactttccagaagatagt
gcggtacttcctgctgttccccggagcaaagtgtcatcaaactcttcctctccttccccc
tcttccccttcatcgccatcatcgtcatcgccatcttcaacagcctatagctcaagtgat
gcggactctgatggaacgccctgtaagacttcaaaagctttgggccggggctctaactct
tacagtgagaatatagaaaggaatctgtccaatcacaggtcacaaaatcattcagcaaca
atggccacccccactaataaaggcaacaagagccgacagcttgctaacaaaagtgctcaa
gggccacacaacaaccccaacaagatccagcaaaacagcaagtcccaaaaactcaacatg
aagaagaggaaacctcagcgtgaggtagcgcatgatgacttttgtagatag
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