Sinocyclocheilus rhinocerous: 107756221
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Entry
107756221 CDS
T04916
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04136
Autophagy - other
srx04140
Autophagy - animal
srx04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107756221
04136 Autophagy - other
107756221
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107756221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107756221
03029 Mitochondrial biogenesis [BR:
srx03029
]
107756221
Membrane trafficking [BR:
srx04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107756221
Others
Rab GTPases of specific organelles
Auto phagosome
107756221
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107756221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
eIF2A
Ge1_WD40
Nup160
KASH_CCD
DUF6212
Fez1
ADIP
Crescentin
nos_propeller
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
107756221
NCBI-ProteinID:
XP_016428744
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKEIQSNEAKMLEYQQQISHLEGE
CRELRNSLADLERANQTLRDEYDALQITFSALEEKLRKTTEDNQELVTRWMAEKAQEANK
LNAENEKDSRRRQAKLQKELADAAKEPLPIEPDDDIEVLTEDAGKGTGETSPSRQISRTP
SRRVSQPPPPAGLLDSISNIFGLSDSVQPGFVPSDSRRRRSVNSFGSSPESAEVPSACAD
VRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNA
GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNSRIVSGS
YDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRSESIVCELEL
LGRVTSLDLNHDRTELLSCSRDDLVKIIDLRSNAVRQTFDAQGFKCGSDFTRVTFSPDGS
YVAAGSADGVLYIWNVLTGKLDKTLDKGHSSAINSVSWSPSGAYVVSVEKGSKAVLWSDM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatgagaattaaacatcaagaggagctgacggagctgcacaagaaacgagga
gagttggcccagagtgtgattgaactaaacaaccagattcagcagaaagacaaagagatc
cagagtaatgaagccaagatgttagagtatcagcagcagatctctcatctggaaggagag
tgtcgcgagctgcgcaactctctggccgatctggaacgagccaatcagacgctgcgagac
gagtacgatgccctgcagatcacgttcagcgccctggaggagaaactacggaaaaccaca
gaggacaatcaggagctggtgacacgctggatggccgagaaagcgcaggaggccaacaaa
ctcaacgctgagaacgagaaggactccaggcgcagacaggcgaagcttcagaaggaattg
gcggacgcagcgaaggaacctcttcccatagagccagatgatgacatcgaagttctcaca
gaggatgctgggaagggaacgggtgagacgtcaccgagcagacagatcagtcgcacaccc
agcagacgagtgtctcagcctcctcctcctgctggactgctggattccatctctaatatc
tttggcttgtctgattctgtccaacctggtttcgtcccatctgactccagaagacggcgc
tcggtgaattcgttcggctcgtctcctgaaagcgcagaggtgccgtcggcgtgcgctgat
gtccgagttccctccactgcgctacacatctttgacgcccacgatggcgaagtgaacgcc
gtgaggttcagtcccggttcccgtctgcttgccacgggaggaatggaccgcagggtgaag
ctctgggaggtcgtttctgggcgatgtgaacctaaaggtgcgctgacgggcagtaatgct
ggaatcaccagcatagagtttgatagtgcgggctcgtatctattggctgcgtctaatgat
tttgccagcagaatctggacggttgatgattacagactgcggcacacactcacagggcac
agcgggaaggttttatccgctcggtttctcctcgataactctcggatcgtctccggcagc
tacgatcgaacgctcaagctctgggacttacgcagcaaagtctgcatgaagacggtgttt
gctggttctagctgtaatgacatcgtctgcacggagcagtgtgtgatgagcggacacttc
gataagaaagttcgtttctgggacatcaggtcggagagtatcgtgtgtgagctggagttg
ctgggacgcgttacatctttggacctcaatcacgaccggaccgagctgctgagctgctct
cgtgacgatctggtgaaaatcatcgacctgcgcagtaatgcagtgcgacagacgtttgat
gctcaaggtttcaagtgtggttcagacttcaccagggtcacgttcagtcctgatgggagt
tacgtggcggctggttctgcagacggcgttctgtacatttggaacgttctgacggggaaa
ctagacaaaacccttgataagggtcacagttctgccataaattcggtgtcctggtctcca
tcgggcgcgtacgtggtcagcgttgagaaaggcagcaaggccgtgctttggtctgacatg
tga
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