Serratia rubidaea: AXX16_0080
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Entry
AXX16_0080 CDS
T04417
Name
(GenBank) Valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
srz
Serratia rubidaea
Pathway
srz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AXX16_0080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srz01007
]
AXX16_0080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srz03016
]
AXX16_0080
Enzymes [BR:
srz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
AXX16_0080
Amino acid related enzymes [BR:
srz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AXX16_0080
Transfer RNA biogenesis [BR:
srz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AXX16_0080
Prokaryotic type
AXX16_0080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AML55842
LinkDB
All DBs
Position
85667..88543
Genome browser
AA seq
958 aa
AA seq
DB search
MEKTNSQLDTAYNPSQIEQKLYDHWEEQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHA
FQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDK
IWQWKAESGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYNEDLIYRGKRLV
NWDPKLRTAISDLEVENRESKGSMWHLRYPLADGAKTAEGKDYLIVATTRPETVLGDTGV
AVNPEDPRYKDLIGKEIVLPLVGRRIRIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRH
GLPMINILTFDGDIRQEAEVFDTLGEASDVYSSDIPAQFRGLERFAARKAVVAAFEELGL
LDEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMY
FSWMRDIQDWCISRQLWWGHRIPAWYDANGKVYVGRNEEEVRRDNNLAADVALSQDEDVL
DTWFSSGLWTFSTLGWPEQTDALKTFHPTSVMVSGFDIIFFWIARMIMLTMHFIKDENGK
PQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEK
IRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVL
MNTEEHDCGFNGGEMQLSLADRWILAEFNRTVKAYRDALDSYRFDIAAGILYEFTWNQFC
DWYLELTKPVISNGSEAEQRGTRNTLITVLEALLRLAHPIIPFITETIWQRVKLQKGISA
DTIMLQPFPAYDSALEDEQALADLEWIKQAIIAVRNIRAEMNIAPSKTLEVLLRNANGDA
QRRVQENQNFIARLARLESIALLPAGEKGPVSVTKLVDGAELLIPMAGFIDKDAEIARLA
KEMAKLDGEIAAIEGKLSNEGFVSRAPEAVVAKERDRLAACKEGKVKLQEQQATIAAL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacaaacagtcagctcgataccgcctataacccgtcccagatcgaacagaaa
ctgtacgaccactgggaagagcaaggttacttcaagcccaatggcgacaccagccaggaa
agcttctgcatcatgatcccgccgccgaacgtcaccggcagcctgcacatgggtcacgct
ttccagcagaccatcatggacaccatgatccgctaccagcgcatgcagggtaaaaacacc
ctgtggcaggcgggcaccgaccacgccggcatcgccacccagatggtggtggagcgtaaa
atcgccgcggaagaaggcaaaacccgccacgactacggccgcgacgcgtttatcgacaaa
atctggcagtggaaggcggaatccggcggcaccatcacccgtcagatgcgccgcctcggc
aactcggtagactgggagcgcgagcgcttcaccatggacgacggcctgtccaacgcggtg
aaggaagtgtttgtccgcctgtacaatgaagatctgatctaccgcggcaagcgcctggtg
aactgggatccgaaactgcgcaccgccatctccgatctggaagtggaaaaccgcgaatcc
aaaggttccatgtggcacctgcgctatccgctggccgacggcgcgaagaccgctgaaggt
aaagactacctgatcgtcgccaccacccgtccggaaaccgtgctgggcgacaccggcgtg
gcggtaaacccggaagacccgcgctacaaggatctgatcggcaaagagatcgtgctgccg
ctggtaggccgccgcatccgcatcgtcggcgatgaacacgccgatatggaaaaaggcacc
ggctgcgtgaaaatcaccccggcgcacgacttcaacgactatgaagtgggcaagcgccac
ggcctgccgatgatcaacattctgaccttcgacggcgatatccgtcaggaagcggaagtg
ttcgataccctgggcgaagccagcgacgtttacagcagcgatatcccggcgcagttccgc
ggcctggagcgcttcgcggcgcgtaaagccgtggtggccgcctttgaagagcttggcctg
ctggacgaaatcaaaccgcacgacctgacggtgccttacggcgaccgcggcggcgtggtc
atcgaaccaatgctgaccgaccaatggtacgtgcgcaccgcgccgctggcgaaagtggcg
gtggaagcggttgagcaaggcgatattcagttcgtgccgaagcagtacgaaaacatgtac
ttcagctggatgcgcgacattcaggactggtgtatctcccgtcagctgtggtggggtcac
cgcattccggcctggtacgacgccaacggcaaagtgtacgtcggccgcaacgaggaagaa
gtgcgccgcgacaacaacctggcggcggacgtggcgctcagccaggacgaagacgtgctg
gacacctggttctcttccggcctgtggaccttctccaccctgggctggccggagcagacc
gacgcgctgaaaaccttccacccgaccagcgtgatggtcagcggcttcgacatcatcttc
ttctggatcgcccgcatgatcatgctgaccatgcactttatcaaagatgaaaacggcaag
ccgcaggtaccgttccacaccgtttacatgaccggcctgatccgcgacgacgaagggcag
aagatgtccaagtccaagggcaacgtcattgacccgctggatatggtcgacggcatttcg
ctggaagatctgctggaaaaacgcaccggcaacatgatgcagccgcagctggcggagaaa
atccgcaagcgcaccgagaagcagttcccgaacggcatcgaaccgcacggcaccgacgcc
ctgcgctttaccctggcggcgctggcctccaccggccgcgacatcaactgggatatgaag
cgcctggaaggctaccgcaacttctgtaacaagctgtggaacgccagccgctttgtgctg
atgaataccgaagagcacgactgcggcttcaacggcggcgaaatgcaactgtcgctggcg
gaccgctggatcctggcggaattcaaccgtacggtgaaagcctaccgcgacgcgctggac
agctaccgcttcgacatcgccgccggcattctgtacgagttcacctggaaccagttctgc
gactggtacctggagctgaccaagccggttatcagcaacggcagcgaagcggaacagcgc
ggcacgcgcaacacgctgatcaccgtgctggaagcgctgctgcgtctggcgcacccgatc
attccgtttatcactgaaaccatctggcagcgcgtcaagctgcaaaagggcatcagcgcc
gataccatcatgctgcagccgttcccggcctacgacagcgcgctggaagatgagcaggcg
ctggcggatctggagtggatcaagcaggccatcatcgcggtgcgtaatatccgcgccgag
atgaacatcgcgccaagcaaaacgctggaagtgctgctgcgcaacgctaacggcgacgcc
cagcgccgcgtgcaggagaaccagaactttatcgcccgtctggcgcgtctggaatccatc
gcgctgctgcctgccggcgagaaaggcccggtttccgtcaccaagctggtggacggcgcc
gaactgctgatcccgatggccggctttatcgacaaggatgcggaaattgcgcgcctggcg
aaagagatggccaagctggacggcgagatcgccgcgattgaaggcaagctgtcgaacgaa
ggctttgtctcgcgcgcgccggaagcggtcgtcgccaaagagcgcgatcgcctggcggcc
tgcaaggaaggcaaggtgaaactgcaagagcagcaggcgaccatcgccgcgctgtaa
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