Serratia rubidaea: AXX16_2343
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Entry
AXX16_2343 CDS
T04417
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
srz
Serratia rubidaea
Pathway
srz02020
Two-component system
srz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXX16_2343
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXX16_2343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srz03021
]
AXX16_2343
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
srz02035
]
AXX16_2343
Transcription machinery [BR:
srz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXX16_2343
Bacterial motility proteins [BR:
srz02035
]
Flagellar system
Flagellar assembly proteins
Stator
AXX16_2343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0147
UPF0122
Tweety
Motif
Other DBs
NCBI-ProteinID:
AML58044
LinkDB
All DBs
Position
2531368..2532087
Genome browser
AA seq
239 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWLRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRHAREVAQAMQRLEQQLGRPPAELEV
AQALDISLSDYRQILLDTNNSQLFSYDEWREEQGESVELMLEGHKEANPLQQLLEGNLRQ
RVINAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLAND
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcgtgatggacaaaaactctctctggctgcgctac
gttccgttggtgcgccacgaggcgctgcgcctgcaggtccggctgcccgccagcgtcgag
cttgacgatctgctgcaggccggcggcatcgggctgctgaacgccgtcgaacgttacgac
gcgctgcaggggaccgcctttaccacctatgcggtgcagcgcatccgcggcgcaatgctc
gatgagctgcgcagccgcgactgggtgccgcgcagcgtgcggcgtcacgcccgcgaagta
gcgcaggcgatgcagcggctggaacagcaactggggcgtccgcctgccgagctggaggtg
gcgcaggcgctggatatttcgctcagcgattaccgtcagatcctgctggataccaataac
agtcagctgttctcctacgacgagtggcgcgaagagcagggggaaagcgtcgagctgatg
ctggaagggcataaagaggccaatccgctgcagcagctgctggagggcaacctgcgtcag
cgggtgattaacgccatcgaagccctgccggagcgcgagaagatggtgctgacgctctat
taccaggaggagttgaacctgaaggagattggcgcggtgctggacgtcggcgaatcgcgc
gtcagtcaattacacagccaggcgattaaacgtctgcgcgcccgtttggcaaatgattga
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