Serratia rubidaea: AXX16_4386
Help
Entry
AXX16_4386 CDS
T04417
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
srz
Serratia rubidaea
Pathway
srz00470
D-Amino acid metabolism
srz00550
Peptidoglycan biosynthesis
srz01100
Metabolic pathways
srz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXX16_4386
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXX16_4386
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AXX16_4386
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
AXX16_4386
Enzymes [BR:
srz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AXX16_4386
Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
Precursor biosynthesis
Amino acid ligase
AXX16_4386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
ATP-grasp
ATPgrasp_Ter
RimK
TTL
ATPgrasp_YheCD
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AML60056
UniProt:
A0A140F152
LinkDB
All DBs
Position
complement(4701016..4701936)
Genome browser
AA seq
306 aa
AA seq
DB search
MTDKVAVLLGGTSAEREVSLQSGAAVLAGLREAGIDAHGIDTRDVPVSQLKAQGFSKVFI
ALHGRGGEDGTLQGMLEFLELPYTGSGVMASALTMDKWRTKLVWQSLGLPIAPYVALHRA
QFNGAGKHQALADIEALGLPLIVKPSREGSSVGMSKVEAFGALEAALDEAFRHDDDVLVE
KWLSGPEYTVAFIGDSVMPSIRIQPAGVFYDYQAKYIADDTQYFCPSGLSAEQEAELAAL
AVRAYRALDCSGWGRVDVMQDNDGSFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaagtcgccgtcctgctgggcggcacctcggcggaacgtgaagtttccctg
cagtccggcgcggcggtgctggccggcctgcgcgaagccggtatcgacgcgcacggcatc
gatacccgcgatgtcccggtgtcgcagctgaaggcgcaggggttcagcaaagtgtttatc
gcgctgcacgggcgcggcggcgaggacggcaccctgcaggggatgctggagttcctggag
ctgccctataccggcagcggcgtaatggcctcggcgctgaccatggacaaatggcgcacc
aaactggtgtggcagtcgctgggtctgccgatcgccccttacgtggcgctgcaccgcgcg
cagtttaacggcgcaggcaagcatcaggcgctggcggacatcgaagccctggggctgccg
ctgatcgtcaagccaagccgcgaaggctccagcgtcggcatgagcaaggtggaagccttc
ggcgcgctggaggcggcgctggacgaagccttccgtcacgacgacgacgtgctggtggag
aagtggctgagcggcccggagtacaccgtggcgtttatcggcgacagcgtgatgccgtcg
attcgcattcagccggccggcgtattttacgactaccaggcaaagtacattgcggacgat
acgcagtatttctgcccgagcggtttgtcggccgagcaggaggccgagctggccgcgctg
gcggtacgcgcctaccgtgcgctggactgcagcggctggggccgcgtcgatgtaatgcag
gataacgatggcagcttctatctgctcgaggtgaacacctcgccgggcatgaccagtcat
agcctggtgccgatggcagcacgtcagtatggattaagcttctcgcaactggtggcgaga
attttggaattggccgactga
DBGET
integrated database retrieval system