Swingsia samuiensis: E3D00_00290
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Entry
E3D00_00290 CDS
T06080
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00540
Lipopolysaccharide biosynthesis
ssam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E3D00_00290
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssam01005
]
E3D00_00290
Lipopolysaccharide biosynthesis proteins [BR:
ssam01005
]
Lipid A
E3D00_00290
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Paralog
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GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
QDH16179
UniProt:
A0A4Y6UF59
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Position
complement(63763..64764)
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AA seq
333 aa
AA seq
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MQKRLSLSFGALSLIVLSTSARATPQQDHYGTWTLQGENDAVSTFKGTSDQYYTSGLRFN
WTSGTDNLPRPIAHLNHFLMGDGVQRISLGLQQLIFTPRATQVERPPLGDRPYAGVMLGT
VNLINDTDLSRTVMGFQAGVLGPAALGRQLQNGFHKAISDTPNKGWQHQLANQPIFQLQA
GRIWRLPVAKVYGIEMDVLPAVSGSAGDYRTYASVASNFRIGQGLDSDFGNATIGPGLDG
TDAYKATRPVAWYFYGGVDGQAVGYDATLQGSTVRGNSPHTEKKWDVGEIHAGVAVMWHG
MRLSYSQNWQSTEFRGQKAGLFNYGSLKFSVKF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaagcggttatctctttcttttggcgctttgtctttaattgtgctgagcacttca
gcaagggcgactcctcaacaagatcattacggaacgtggactttacaaggggagaatgac
gctgtttcgacgtttaaaggaacgtccgatcagtattatacctctgggttacgttttaat
tggacctctggcacggataatttgccaagaccaatcgctcatttgaatcattttttaatg
ggcgatggtgttcagcgaatcagtcttggtttgcaacagcttatttttacaccgcgtgct
acgcaggtagagcggccaccattgggggatcgtccatatgctggcgttatgttgggaact
gttaatctaattaatgatacagatttgtcccgaaccgtgatgggttttcaggcgggtgta
ttgggtcccgcagcgttagggcgtcagctacaaaacggtttccataaggcaatcagcgat
accccgaacaaaggatggcaacatcagcttgcaaatcagcctatttttcagctgcaagcc
gggcgtatttggcgtttgcctgttgcaaaagtctatgggattgaaatggatgtgcttcca
gcagtatcaggttctgcgggtgattacagaacgtatgcaagtgttgcttcaaactttcgg
attggtcagggtttagatagtgactttggaaatgcgaccattgggccaggactggatgga
accgatgcgtataaagcgacgcgccccgttgcttggtacttctatggtggcgtggatggg
caagctgtaggctatgacgctacgcttcaaggtagtactgtaagaggcaattcacctcat
accgaaaaaaaatgggatgtgggcgaaattcatgctggtgttgctgtgatgtggcatggc
atgcgtttgtcatatagccaaaattggcaatcgacagagtttagaggccaaaaggctggg
ttgtttaactatggctctttaaagttctctgtaaagttctaa
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