KEGG   Swingsia samuiensis: E3D00_01090
Entry
E3D00_01090       CDS       T06080                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
ssam  Swingsia samuiensis
Pathway
ssam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E3D00_01090 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssam02044]
    E3D00_01090 (tssH)
Secretion system [BR:ssam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E3D00_01090 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat NACHT nSTAND3 Zeta_toxin ATPase_2 Clp_N AAA_25 Torsin AAA_18 AAA_30 SRP54 DUF815 SLFN-g3_helicase Hpr_kinase_C CbiA
Other DBs
NCBI-ProteinID: QDH16324
UniProt: A0A4Y6UH37
LinkDB
Position
complement(231261..233873)
AA seq 870 aa
MAAVIDLQRLVGHLDDACRAALEAAAGAALSRTHYTVEVEHWLAQILQNEKSDVSQFLAH
EEINSAQVAAGLNTVLDRFSTGNGRSPALSPELVGILKDGWLIATVDRSDRVLRSGHVFC
AALADEVVASRLRAAIPALRKLASEVLIRDFDHLAQGSVEGVTSLQSGEEGEIAPPVNKG
ALDRFTTDLVELARSGKIDPILGRDQEIRQVIDILTRRRQNNPILTGEAGVGKTAVVEGL
ALRIAQGDVPEALEQVAIRTLDLGLLQAGAGVKGEFENRLRSVIDEVKNSPTPIVLFIDE
AHTLIGAGGQAGQGDAANLLKPPLARGELRMIAATTWAEYKRYFEKDAALTRRFQTVKVE
EPNEAVAIDMLRGLVAVLEKHHGVRILDEATEAAVRLSSRFIPDRQLPDKGVSLLDTACA
RVAMSQGSTPGDIENRRRRVAAIEREIELLEREALSGASHETRVAKLRAEAEEISERLQE
DEARLAQEKDVVHALMELRLEAEKEGADSAEAREKAIALSDELKNLQGESPMIHPVVDAQ
VVAEIVENWTGVPARRMRSDEVERLLRLEDDLRARVVGQDHALKAVSEAIRVSRAGLTDP
RKPVGVFLMAGTSGVGKTETATALAELLYGGAQSLTTINMTEFKEEHKVSLLMGSPPGYV
GYGEGGVMTEAVRRRPHSVLLLDEFEKAHPGVQDIFFQAFDKGAMKDGEGRDIDFRNTII
IMTTNAGTQLIDALFADPETAPDAETLATALNEEMLKHFKAAFLGRVTLVPYLPLSEETR
RMIVQLQVAKVIKRVASVYGVTLTFDETAIEALQARSASSASGARIIERTIAVEILPLLA
RSFLGRRSDEPSVDIRLIYENGFKLEQAGA
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggctgcagtgatcgatcttcagcgactagttgggcatttggatgatgcgtgtcgagcg
gctttagaagcggctgcaggtgcagctttatcgcggacacattatacggtggaagttgag
cactggctggcgcagattcttcagaatgaaaaatcggacgtttcgcagtttttagcgcat
gaagagattaattctgcgcaagttgccgctgggcttaatacggtcttggatcggttctcg
actgggaatggtcgtagtccggctctttctccagagttggtcgggattcttaaagatggt
tggttgattgcaacggttgatcgatcagaccgggtgttacgctcagggcatgttttttgt
gcggcgttggcggatgaggttgttgcgtctcggttacgagcagctatccctgcgttgcgt
aagctcgcaagtgaagttttgattcgggactttgatcatctagctcaaggaagtgttgaa
ggtgtaacgagtctccaatcaggggaggagggagagatcgctccgcctgttaataaaggg
gcgcttgatcgctttacaacggacttggttgaacttgctcggagtggaaaaatagaccct
attttggggcgtgaccaagagatccggcaggttatagatatattgacacgccgtcggcaa
aataaccccattttgacgggggaagctggcgttggaaaaacggctgttgtggaggggttg
gcacttcgtatcgcacaaggagatgtgcctgaagcgttggaacaagtagcaattcgcacg
ttggacttgggcttgttgcaggcaggcgctggtgtgaaaggcgagtttgaaaatcgctta
cgctcggtcattgacgaggtcaaaaattctcccacaccgatcgtcttgtttattgatgaa
gcgcatacattgattggagcgggtggtcaggcggggcagggtgatgctgcgaacctgtta
aagccacctttggcgcgtggtgagttgcggatgatcgctgcaacaacatgggcagaatat
aaacgttattttgaaaaagacgccgcattaacccgtcgtttccaaaccgtaaaagtagaa
gagcctaatgaagccgtagctattgatatgctacgcgggttagttgcggtgcttgaaaag
catcatggtgtgcgcattttggatgaagccactgaggcggctgttcggttgtcttctcgc
tttattccagatcggcaactgcctgataaaggggtgagtttgcttgatacggcgtgtgcg
cgtgtcgcgatgagtcaaggttctacccccggagatattgaaaatcggcgccggcgtgtt
gcagcaattgaacgtgagattgaactgcttgaacgtgaagcactttcaggcgcttcgcac
gagacgcgtgttgcaaaattgcgtgctgaagcggaggagatttcagagcgtttgcaagaa
gacgaagcgcgtttggctcaggagaaggacgttgttcatgcgttgatggagctgcgccta
gaagctgaaaaagaaggggctgattctgctgaggcgcgtgaaaaggcgattgctctttca
gacgagctcaagaacctacagggtgaaagcccaatgatacaccctgtcgtagatgcgcag
gttgtggcggagattgttgaaaactggacgggtgttccagcgcgtcgcatgcgttctgat
gaggtcgagcgtttgttgcgtttggaagatgatttgcgtgctcgtgtggtcgggcaggat
catgcacttaaagctgtttcagaggcgatacgtgtttctcgcgcaggcctcacagacccg
cgtaagccagtaggggttttccttatggcggggacatcaggtgtcggtaaaaccgagacg
gcgaccgctttggctgagttgctctatggaggcgctcaaagtcttacaaccattaatatg
acggaattcaaggaggagcataaggttagcctcttgatgggaagcccccctggttatgtc
ggttatggtgaaggcggtgttatgacagaggctgtgcgccgtcgcccacattctgttttg
ttgctggatgagtttgaaaaagcgcaccccggtgtgcaggatattttctttcaggcgttt
gataagggtgccatgaaagatggtgaagggcgagatatcgactttcgcaatacgattatc
attatgacaacaaatgcaggaacgcagttgattgatgcgctctttgcagacccagagacg
gcgccagacgctgaaactcttgcaacagcgttgaatgaggaaatgttaaagcatttcaag
gctgcgtttttggggcgtgtaacattggtgccttatttgccgctctcggaagagacgcgt
cgaatgattgttcagttgcaagtggcaaaagtgatcaaacgggtagcgtctgtttatggt
gtcacattgacatttgatgaaacggcaattgaagcgctacaggcgcgctctgcttcaagt
gcttctggagcgcgaatcattgaacgaacgatcgctgtagagattttgccgcttttggcg
cgctctttccttggtcggcgttcggacgagccatctgttgatatacggcttatctatgag
aatggctttaagctcgagcaggcaggcgcttaa

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