Sphingomonas sanxanigenens: NX02_13295
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Entry
NX02_13295 CDS
T03929
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan00300
Lysine biosynthesis
ssan00470
D-Amino acid metabolism
ssan01100
Metabolic pathways
ssan01110
Biosynthesis of secondary metabolites
ssan01120
Microbial metabolism in diverse environments
ssan01230
Biosynthesis of amino acids
Module
ssan_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NX02_13295
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NX02_13295
Enzymes [BR:
ssan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NX02_13295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHE54355
UniProt:
W0AFA6
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All DBs
Position
complement(2736415..2737650)
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AA seq
411 aa
AA seq
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MKPAGAIPLGYAADDDFMLRIGGERVDALIAAAGDTPLFVYDAALLAARVARLRAAMPGQ
LAIHYAVKANPYPPLVAWMAALVDGLDVASAGELHRALDSGIGAGRISFAGPGKRDRELE
AAIVAGTTLNLESAGEADRALMIADRLGRVPRLAVRVNPDFDLRGSGMRMGGGAKPFGID
AAEVPALIRRLIAAGADWQGLHIFAGSQALDAAAIAETQAATVALAASIAEAVGAVPPLV
NLGGGFGIAYFPGDVPLAVEQVGAALGETLAARAPILAESAFAIELGRWLVGEAGVYLTR
IVDRKTSHGQVFLVTDGGLHHQLAASGNFGTVVRRNYPIAVANRFGRAVEEEVSVVGCLC
TPLDRLGDQVGLPRADVGDVVALFMAGAYGASASPAAFLGHPPAIEMLVGA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccggtgcgatcccgctgggctatgcggccgacgacgacttcatgctgcgg
atcggcggcgagcgggtcgatgcgctgatcgcggcggccggcgatacgccgttgttcgtc
tatgatgcggcgttgctggcggcgcgcgtggcacggctgcgcgcggcgatgccggggcag
cttgcgatccattatgcggtcaaggccaatccctatccgccgctggtggcgtggatggcc
gcactggtcgacgggctcgacgtcgcgtccgccggcgaattgcatcgcgcgctcgacagc
ggcatcggcgccgggcggatctccttcgcagggccgggcaagcgcgaccgggagcttgag
gcagcgatcgtcgccggcaccactctcaacctcgaatcggcgggggaggcggatcgcgcg
ctgatgatcgccgatcgtctggggcgcgttccgcggctcgccgtccgggtcaatccggat
ttcgacctgcgcggctcgggcatgcggatgggtggcggcgccaaaccgttcggcatcgac
gccgccgaggtgccggcgctgatccgccgcctgatcgcggccggcgccgactggcagggg
ctgcacatcttcgccggcagccaggcgctcgatgccgccgccatcgccgagacgcaggcg
gcaaccgtcgcgctggcggcgtcgatcgccgaggcggtgggggcggtgccgccgctggtc
aatctcggcggcggcttcggcatcgcctatttccccggcgacgtgccgctcgccgtcgag
caggtcggcgcggcgctcggcgagacgctggcggcgcgcgcgcccatcctcgccgaatcg
gccttcgcaatcgaactcggccgctggctggtgggggaggcgggggtctatctcacccgc
atcgtcgaccggaagacgagccacgggcaggtcttcctcgtcaccgatggcgggctgcac
caccagcttgccgcgagcggcaatttcggcaccgtcgtgcggcgcaactatccgatcgcg
gtcgccaaccgcttcggacgggcggtggaggaggaggtgagcgtggtcggctgcctgtgc
acgccgctcgaccgcctcggcgatcaggtcggcctgccccgcgcggacgtgggggatgtc
gtcgccctgttcatggccggcgcctatggcgcgagcgcgagccccgccgcctttctcggc
catccgccggcgatcgagatgctcgtgggcgcctga
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