Streptococcus suis BM407 (serotype 2): SSUBM407_1148
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Entry
SSUBM407_1148 CDS
T00935
Symbol
pcrA
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Pathway
ssb03420
Nucleotide excision repair
ssb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSUBM407_1148 (pcrA)
03430 Mismatch repair
SSUBM407_1148 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssb03400
]
SSUBM407_1148 (pcrA)
Enzymes [BR:
ssb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSUBM407_1148 (pcrA)
DNA repair and recombination proteins [BR:
ssb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSUBM407_1148 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SSUBM407_1148 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAZ56006
UniProt:
A0A0H3MVK6
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All DBs
Position
complement(1225743..1228022)
Genome browser
AA seq
759 aa
AA seq
DB search
MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMKERAYALNPATQACLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRSLM
KRILKNLNLDPKKWSERSILGTISNAKNDLIDDKAFEAQAGDLYTQIVAKCYTAYQKELR
QSEAVDFDDLIMLTLRLFDQNPEVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVLLEENYRSTKNVLQAANEVIENNRN
RRPKKLWTQNAQGDLITYYRARDENDEAIFVAGQIDQLHREGKAYKDFTVLYRTNAQSRT
IEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNIIANPSDNISYERIVNEPKRGVGPGT
VDKLRDFATSHSMSLLEASQDIMLSPVKGKAAQAVFDLANLLYNLRNQLDNLTVTQVVEA
VLNQTGYIDALAAQNTLEANARIENIQEFLSVTKNFDEKDVEEEETGLDKLTRFLLDLAL
IADTDDGDTESSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEEEDELEEERRLAY
VGITRAEQTLYLTNANSRLLFGRTNYNQPSRFIREISSDLLDYQGLARPANTSFKASYVN
GRATQFGQGMSLQQALQSRKASVQPSAKLGGSMPFASSNQSSSSGTNWSVGDIAVHKKWG
RGTVLEVSGSGSNQELKINFPDMGLKKVLASLAPISKED
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaaacggaatgaatgacagacaggcagaagcggtacagacgacggaa
ggtccgcttttgattatggcaggggctggttcgggtaagacgcgagtcctgacccaccgt
atcgcttatttgattgatgaaaaaatggtcaatccttggaatatcctagccattaccttt
accaacaaggcggcacgggagatgaaggagcgggcctatgccctcaatcctgccacgcaa
gcctgtttgatagctaccttccactccatgtgtgtgcggattttgcgtcgggatgctgac
catatcggttacaatcgcaattttacgattgtcgatccaggtgagcaacgcagtctcatg
aaacggattttaaaaaatctcaatctagatccgaaaaagtggagtgaacgttctatcctg
ggcaccatttccaatgccaaaaacgacttgattgatgacaaggcatttgaagcgcaggca
ggcgacctatacacgcagattgttgctaaatgctacacggcttatcaaaaggaactaaga
cagtcagaggccgttgactttgatgatttgattatgttgacgctccgcctttttgaccaa
aatccagaggtcctgacctattaccagcagaaattccagtatatccatgtcgatgagtat
caggataccaaccatgcccagtaccaattagtcaagctcctggcatcacgtttcaagaat
atctgcgtggtcggagatgcggaccagtctatctatggttggcgtggtgcggatatgcaa
aatatcctggactttgaaaaggactatccagagagcaaggttgtgcttttggaggaaaac
tatcgttcgaccaagaacgtcttgcaggctgccaatgaggtcatcgaaaacaaccgcaat
cgacgtcccaaaaaactctggacacagaatgcccaaggggatttgattacttactatcgt
gccagagatgagaatgacgaggcgatttttgtcgcagggcagattgaccagttgcaccga
gaaggcaaggcttataaggattttacagttctctaccgtaccaatgcccaatcacgtacc
attgaagaagccctgctcaaatctaatatcccttataccatggttggaggaaccaagttc
tacagccgtaaggaaatccgggatgtgatttcttatttgaatatcattgcaaatccatcg
gataatatctcctatgaacgcattgtcaatgagcccaaacgtggcgttggacctggtacg
gttgacaaactccgtgattttgcgaccagccacagtatgtccttgctagaagcttctcag
gatattatgttgtcaccagtcaagggcaaggcagcgcaggcagtctttgacctagccaat
ctcctctataatcttcgcaatcaattagacaacttgacggttacccaagtagtcgaggca
gtattgaaccaaacaggctacatcgatgcccttgcagcacaaaataccctggaagcaaat
gcccgcattgaaaacatccaggaattcctttctgttaccaaaaactttgatgaaaaggat
gttgaggaagaagagacaggtctagataaattaacacgcttcctgcttgatttggccctg
attgctgacacagatgatggcgatacagaatcttcagaagtgactcttatgaccctccac
gcagccaaaggtctggaatttccagttgtcttcttgattggtatggaggaaaatgtcttc
ccacttagtcgtgcagcagaagaagaggacgaattggaggaagaacgtcgtttggcatac
gtaggcatcacccgtgctgagcagactctctacctgaccaatgccaattctcgactcctt
ttcggtcgcaccaactacaaccaaccaagccgctttattcgagaaatttccagtgacttg
cttgattatcaaggcctcgctcgtccagctaatactagctttaaggcttcttatgtcaat
ggcagagcgacacagtttggacaaggcatgagcttgcaacaagccctacaaagtcgaaaa
gcatccgtacaaccatctgccaagctcggaggtagtatgcccttcgcatcaagcaaccaa
tcgtcaagctcaggcaccaactggtcagttggtgacatcgcagtccataagaaatggggc
cgcggaacagtccttgaagtatcaggttcaggcagcaatcaagaactcaaaatcaatttc
cctgatatgggactcaaaaaagtcttggcaagcttagcgccgataagtaaagaagattaa
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integrated database retrieval system
