Sus scrofa (pig): 100037289
Help
Entry
100037289 CDS
T01009
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04620
Toll-like receptor signaling pathway
ssc04621
NOD-like receptor signaling pathway
ssc04622
RIG-I-like receptor signaling pathway
ssc04623
Cytosolic DNA-sensing pathway
ssc05160
Hepatitis C
ssc05161
Hepatitis B
ssc05162
Measles
ssc05164
Influenza A
ssc05167
Kaposi sarcoma-associated herpesvirus infection
ssc05168
Herpes simplex virus 1 infection
ssc05169
Epstein-Barr virus infection
ssc05203
Viral carcinogenesis
ssc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100037289 (IRF7)
04621 NOD-like receptor signaling pathway
100037289 (IRF7)
04622 RIG-I-like receptor signaling pathway
100037289 (IRF7)
04623 Cytosolic DNA-sensing pathway
100037289 (IRF7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100037289 (IRF7)
09172 Infectious disease: viral
05161 Hepatitis B
100037289 (IRF7)
05160 Hepatitis C
100037289 (IRF7)
05164 Influenza A
100037289 (IRF7)
05162 Measles
100037289 (IRF7)
05168 Herpes simplex virus 1 infection
100037289 (IRF7)
05167 Kaposi sarcoma-associated herpesvirus infection
100037289 (IRF7)
05169 Epstein-Barr virus infection
100037289 (IRF7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100037289 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100037289 (IRF7)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100037289 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Tecti-min-caps
Motif
Other DBs
NCBI-GeneID:
100037289
NCBI-ProteinID:
NP_001090897
Ensembl:
ENSSSCG00000012853
Vega:
OTTSUSG00000002856
UniProt:
A0ZVR0
A0A4X1VZ72
LinkDB
All DBs
Position
2:complement(372235..375572)
Genome browser
AA seq
487 aa
AA seq
DB search
MAAAPDRGCPRVLFGDWLLGEVSSGRYAGLRWLDEARTRFRVPWKHFARKDLGESDSRIF
KAWAVARGRWPPRSSEGAQPIPEGALRASWKTNFRCALHSTRRFVMLQDNSGDPTDPHKV
YMINPELGCGEGPGFNPGEEEALEDAPPPRGELPGPRLAAHTGERLRHELARPSPEPCTP
SPAGDGGDLLLQALQQSCMEDHLLEAAWGVDLTPPEVPYAGPLPAPVPWKPQEAEPCTTL
YPRVCTRMAGERGAASPSCSQLGLHAGPSLEALDLTIMYKGRTVLQEMVGGPSCVLLYGS
PGPAGAAAEPQQVAFPSPAELPDQKQLHYTEKLLQHVAPGLQLEFRGPKLWARRLGKCKV
YWEVGGPLGSGSPSTPACLLPRDCDTPIFDFGTFFQELMEFRARRRQGSPHYTIYLGFGQ
DLSVGRPKEKSLVLVKLEPWLCRTQLESVQREGVSSLDSGSLSLCLSPSNSLYDELERFL
MEVEQPA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggctcctgacagggggtgcccacgcgtgctcttcggagactggcttctgggc
gaagtcagcagcggccgttacgcagggctgcgatggctggatgaagccagaacacggttc
cgcgtgccctggaagcacttcgcccgaaaggacctgggcgagtccgactcgcgcatcttt
aaggcctgggccgtggcccgcggcaggtggccgccccgcagcagcgaaggtgcgcagccg
atcccggagggtgccctccgcgcctcctggaaaaccaacttccgctgtgccctgcacagc
acgcggcgcttcgtgatgttgcaggacaactcaggggaccccactgaccctcataaggtg
tatatgatcaaccccgagctggggtgcggagaaggcccaggcttcaacccgggggaagag
gaggccctcgaggatgccccacccccaaggggtgagcttcccgggccgcgcctggcagca
catactggtgagaggctgaggcacgagctggccaggccgagccctgaaccctgcacccca
agcccagctggagatggtggggacctcctgctccaggctctgcagcagagctgcatggag
gaccatctgctggaagctgcatggggcgtggatctgaccccccccgaggttccatatgca
ggcccactcccagccccggtgccctggaagccccaagaggcggagccctgcaccacactc
tacccccgtgtctgcacgcggatggcaggcgagcggggcgcggccagtcccagctgctca
cagctcggtctgcacgcagggcccagcttggaggccctggacttgaccatcatgtacaaa
ggtcgaacggtgctgcaggagatggtggggggccccagctgtgtgctcctgtacgggtct
ccgggcccggctggcgcggctgcagagccccagcaggtagccttccccagccccgctgag
ctgcctgaccagaagcagctccactacacagagaagctgctgcagcacgtggcccccggc
ctgcagctggagttccggggacccaagctgtgggcccggcgcctgggcaagtgcaaagtc
tactgggaggtgggagggcccctgggctctggcagcccctccacccccgcctgcctgctg
ccccgagactgcgacacccccatcttcgacttcggcaccttcttccaagagttgatggag
ttccgggcccgccggcgccagggctccccacactacaccatctacctgggcttcgggcag
gacctctccgtggggaggcccaaggagaagagcctcgtcctggtgaagttggagccatgg
ctgtgtcggacacagctggagagcgtgcagcgtgaaggcgtgtcctccctggacagcggc
agcctcagcctctgcctgtccccctccaacagcctctatgacgagctggagcgcttcctg
atggaggtggagcagccggcctag
DBGET
integrated database retrieval system