Sus scrofa (pig): 100048953
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Entry
100048953 CDS
T01009
Gene name
CDH1
Definition
(RefSeq) cadherin-1 precursor
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04015
Rap1 signaling pathway
ssc04371
Apelin signaling pathway
ssc04390
Hippo signaling pathway
ssc04514
Cell adhesion molecules
ssc04520
Adherens junction
ssc05100
Bacterial invasion of epithelial cells
ssc05200
Pathways in cancer
ssc05213
Endometrial cancer
ssc05216
Thyroid cancer
ssc05218
Melanoma
ssc05219
Bladder cancer
ssc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100048953 (CDH1)
04390 Hippo signaling pathway
100048953 (CDH1)
04371 Apelin signaling pathway
100048953 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100048953 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100048953 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100048953 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
100048953 (CDH1)
05216 Thyroid cancer
100048953 (CDH1)
05218 Melanoma
100048953 (CDH1)
05219 Bladder cancer
100048953 (CDH1)
05213 Endometrial cancer
100048953 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100048953 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100048953 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100048953 (CDH1)
04090 CD molecules [BR:
ssc04090
]
100048953 (CDH1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation and ciliogenesis proteins
Other centriole associated proteins
100048953 (CDH1)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Major cadherins
100048953 (CDH1)
CD molecules [BR:
ssc04090
]
Proteins
100048953 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C
Cadherin_pro
RET_CLD1
RibLong
Tic22
Motif
Other DBs
NCBI-GeneID:
100048953
NCBI-ProteinID:
NP_001156532
Ensembl:
ENSSSCG00000025652
UniProt:
C6EVT4
LinkDB
All DBs
Position
6
AA seq
883 aa
AA seq
DB search
MGPPCRSLSALLLLLQVSSWLCQEPEPCNPGFGAKSYTFTVPRRHLERGRVLGRVSFEGC
TGLPRTVYVSDDTRFKVGTDGVVTVKRPFQLHNPEISFLIHAWDSTRRKLSTKVTLKAAT
HHHHHHRHQDSPSGAHTEVLTFPSSHHGLRRQKRDWVIPPISCPENEKGPFPKDLVQIKS
NREKETKVFYSITGQGADTPPVGVFMIERETGWLKVTEPLDREAIAKYILYSHAVSSNGQ
AIEEPMEIVITVTDQNDNKPEFTQEVFRGSVMEGALPGTSVMQVTATDKDDDVNTYNAAI
AYTILSQEPTLPHNQMFTINSDTGVISVLTTGLDRESFPTYTLVIQAADLQGDGLSTTAT
AMITVTDINDNPPIFNPTSYQGSVPENEANVAITTLTVTDGDVANTPAWVAVYTILNDNE
KQFVVITDPVTNEGVLKTAKGLDFEAKQQYILYVAVTNVAPFEVTLSTSTATVTVDVIDV
NEAPIFIPAQKRVEVPEDFGVGLEITSYTAREPDTFMEQKITYRIWRDAANWLEINPDTG
AITTRAELDRENFEHVKNSTYTALIIATDNGSPPATGTGTLLLFLDDVNDNGPIPEPRNM
DFCQRNPQPHVININDPDLPPNTSPFTAELTHGASANWTIEFNDREHESLILKPKKTLEF
GDYKINLKLTDNQNKDQVTTLDVHVCDCEGVANSCRKAGPLAEAGLQVPAILGILGGILA
FLILILLLLLLIRRRRVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDAR
PEVTRNDVAPTLLSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGSG
SEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggccctccgtgccgcagtctctctgctctcctgctgctgttgcaggtctcatcgtgg
ctctgccaagagccggagccctgcaatcctggctttggcgccaagagctacacgttcacc
gtgccccggcggcacttggagagaggccgagtcctgggccgagtgagttttgaaggatgc
accggtctgccaaggacggtctatgtttctgatgacacccgattcaaagtgggcaccgac
ggtgtggttacagtcaaacggccatttcagcttcataacccggagattagttttctcatc
cacgcctgggactccacccgcaggaagctgtccaccaaggtgacactgaaggcggccaca
caccaccatcaccaccaccgccatcaggactctccctctggcgcccacacagaagtgctc
acgtttcccagctcccaccatggtctcagaagacagaaaagagactgggttatccctccc
atcagctgcccagaaaatgagaaaggcccgtttcctaaggatctggttcagatcaaatct
aacagagaaaaagaaaccaaggttttctacagcatcactggtcaaggagccgacacacct
cccgtcggtgtgtttatgattgaaagagaaacagggtggctgaaggtgacggagcctctg
gatagagaagccattgccaagtacattctctactctcatgccgtgtcttccaacgggcaa
gccatcgaggagcccatggagattgtgatcaccgtgaccgatcagaacgacaacaagccc
gagttcacccaggaggtcttcaggggctccgtcatggagggcgctcttccagggacctct
gtgatgcaggtcacggccacggacaaagacgacgatgtgaacacctacaatgctgccatt
gcttacaccatcctcagccaggagcctaccctgcctcacaaccaaatgttcaccatcaac
agtgacacaggagtcatcagtgtgctcaccactgggctggaccgggagagttttcccacg
tacaccctggtgattcaggctgcagaccttcaaggtgacggcttaagcacgactgcaaca
gccatgatcacggtcactgacatcaacgacaacccacccatcttcaacccaacctcgtac
caggggtcggtgccggagaacgaggccaacgtggcaatcaccacactcacggtgaccgat
ggtgacgtcgccaataccccggcgtgggtggctgtttacacaatattaaatgacaacgag
aagcaatttgttgtcatcacagacccagtaaccaatgaaggcgttttgaaaacagctaag
ggcttggattttgaagccaagcagcagtacatcctgtatgtggcagtgactaacgtggcc
ccctttgaggtcaccctctctacttccacggccactgtcactgtggacgtgatagatgtg
aatgaggcccccatcttcatccctgctcagaagagggtggaagtgcctgaggatttcggc
gtgggcctggagatcacatcctacactgcccgggagccagacacgtttatggaacagaag
atcacgtatcggatttggagggatgctgccaactggctggagattaatccggacaccggt
gccattaccactcgggccgagctggacagagagaactttgagcatgtgaagaacagcaca
tacacggccctcattatagccactgacaatggttctccacccgctacgggcacaggcacc
cttctcctgttcctcgacgatgtgaatgacaatggccccatacctgaaccccgaaatatg
gacttctgccagaggaacccacagcctcatgtcatcaacatcaatgatccagatcttccc
cccaacacttctcccttcactgcagaactaacacatggggccagtgccaactggaccatc
gagttcaacgaccgagaacatgaatctctcattttgaagccaaagaaaaccctcgagttt
ggcgactacaagatcaatctcaagctcacagacaaccagaacaaagaccaggtgaccacc
ttagatgtgcacgtatgcgactgtgagggggtggccaacagctgccggaaggccgggcct
ctggccgaagcaggattgcaagttcctgccatcctggggattctgggaggcatccttgct
tttctgatcctgattctgctgctcctgctccttattcggaggagaagggtggtcaaagag
cccttgctgcccccagaagatgacacccgggacaacgtttattactatgatgaagaagga
ggtggagaagaggaccaggactttgacttgagccagttacacaggggcctggatgctcgg
cctgaagtgactcgtaatgatgtggcaccaaccctcctgagtgtgccccagtatcggccc
cgccctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggcagctgat
agtgaccccactgccccaccttatgactctctgctggtgtttgattacgaaggcagtggt
tccgaagctgctagtctgagctccctgaactcctcggagtcggaccaagaccaggactat
gactacctgaacgagtggggcaatcgcttcaagaagctggcggacatgtacggaggcggt
gaggacgactag
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integrated database retrieval system
