Sus scrofa (pig): 100134968
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Entry
100134968 CDS
T01009
Symbol
SYCP2
Name
(RefSeq) synaptonemal complex protein 2 isoform X2
KO
K19529
synaptonemal complex protein 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100134968 (SYCP2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
100134968 (SYCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYCP2_ARLD
SYCP2_SLD
DncV_C
Motif
Other DBs
NCBI-GeneID:
100134968
NCBI-ProteinID:
XP_013840980
Ensembl:
ENSSSCG00000007529
LinkDB
All DBs
Position
17:complement(59875992..59962314)
Genome browser
AA seq
1458 aa
AA seq
DB search
MPIRPDLQHLEKCIDDALRKNDFKPLKTLLQIDICEDVKIKCSKQFFHKLDDLMCRELNK
KDIQTVSTILVSFGRCGKNISILGQAGLLTMIKQGLVQKMVAWFEKSKEIILSQGSSKDE
AVINMIEDFFDLLMVIHDIDDEGKRQVVESFIPRICALVIDSRVNICVQQETLKKMNAML
DKMPQDARKILFNQEMLILMSSMGERILDAGDYDLQVGIVEALCRMTTEKQRQELACQWF
SMDFVANAFKGIKDSEFETDCRMFLNLVNGILGDKRRVFTFPCLSAFLDKYELQIPSDEK
LEDFWIDFNLGSQTLSFYIAGDNDDHQWEAVTVPEEKVQIYSIEVRDSKKLLTIILKDTV
KISKRKGKELLLYFDASLEITNVTQKIFGANKYREFSRKQGISVAKTSVHILFDASGSQI
LVPESQISPVEELSTLKEKANPQEEFVKPPKHIKNSNKGDRKHGQPEIITPSKRKMSEAS
MIVPGAERYTVRSPILLINTSTPQRGRIKPPLQMTSSMEKPGFSKTSENGVDNAVSLKSR
PCEERNREDNTDKHIKTKVIEKAENKDIEYPNQNFNELQEIVPDSQAVGKIDKPVLPGIL
DNICGNKMHSKWACWTPVTNIKLCNNLRASSSSEDTFNQDIIINKNLTKKKSSSSMSDDN
SEETSKVQYGKELMQHNKIDKAEAEACKRNKQQQLDHSKHSEEKNTENTKQNDWRIESET
TFKSVLLNKTVEESVIYRKKYTLSKDVNTAICDKSPSPRKNTKSHRKSGKRLTSELNSWD
LKQKEMREKSKGKGFNDAAESLISQINKRYKPKDGTKSTRKLKESLIDSGFSNKSDLQLR
KEKVQKKSYRQLKTTFVNVTSECPLNDVYNFNLSGADEPVIKLGIQEFQATAREACVDST
ITLVGLRNHDELETSLKTKDKRTVTNHKKKTLFSDTDTEYKCDDSKTDISWLRESKSKPQ
LIGYSRNKNVKKHKSGKSRSSLEREQPRSKMTPDKNITKKVDETVPDGRIRLPRRAAKTK
KNYKDLSNSESESEQEFSHSFKEKLLIKENIHSRSKTMKPPKKQNSFSSEMQKDISKEWK
NSSLLKDTIRDNSLDKSPVSLSGSPSSIEVMRCTEKTTERDFTQDFDYVTKSLSPYPKTS
SPESLNSGVESPINSPNNSEKNLLCGGESCSPIPQSGFLESHSASPLSMASEGREKIWGG
LPCDSTHGSGPTLHVSRKRMYIEKDLSNSDEVALGEREEERASLLPKKLSKSEGTDFQTY
KVSESISPLSTNDFSIPGENWGNEMSDVGMMYEQLNTEFRRKVHIRHKIMDYFTKHSWKT
AQQHIKTMNHQIQEYRIKKLDKFQFIIIKELENFEKDSQSLKDLEKELVGFWEKIFQKFS
AYQKSEQQRLHLLKASLNKNVFYNTDYEETIFTSEMCSMKENMKMIQDRLLKEMQEEELL
NVRRGLKSLFMAHERNNV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgccaataaggccagatctccagcatttagaaaagtgcattgatgatgctttaagaaaa
aatgatttcaaacctttgaaaacacttttacaaatcgatatttgtgaagatgtgaaaatt
aaatgcagcaaacagtttttccacaagttggatgaccttatgtgcagggagcttaataaa
aaggatatccagactgtttcaaccattttggtttcatttggaagatgtggcaaaaatatc
agtatattggggcaagctggacttctaactatgataaaacaaggtctagtccaaaagatg
gttgcctggtttgaaaaatccaaggagattattctgagtcaaggaagttcaaaagatgaa
gctgttataaatatgatagaagacttttttgatcttttgatggtcatacatgacattgat
gatgaaggtaaaaggcaagtagtggaaagtttcataccccgaatttgtgccctggttatt
gactcaagagtgaatatttgtgttcagcaggagactctaaagaaaatgaatgctatgctt
gacaagatgcctcaagatgccaggaaaatactctttaaccaagaaatgttgattctcatg
agtagtatgggagaaaggattttagatgctggagattatgacttacaagtgggtatcgta
gaagctttatgcagaatgaccacagaaaaacagaggcaagaactagcatgtcagtggttt
tcaatggattttgttgctaatgcatttaaaggaattaaagactctgaatttgaaacagat
tgcaggatgtttctcaaccttgtaaatggcatacttggagacaagagaagggtctttaca
tttccttgtttatcagcgtttcttgataaatatgagctgcaaataccgtcagatgaaaaa
cttgaggacttttggatagattttaatcttgggagccagactctgtctttctacatcgct
ggagacaatgatgatcatcagtgggaagcagtcactgtgcctgaggaaaaagtgcaaata
tacagcatagaagtgagagactcgaagaagctcctgactataattctgaaagatacagta
aaaattagtaaacgaaaagggaaagaattgcttttgtattttgatgcatcattagagatc
actaatgtgacacaaaaaatatttggtgcaaataaatacagggaattttcccgaaaacaa
ggtatttcagttgccaaaacatctgtgcatatacttttcgatgcaagtggatcccagatt
ctagtcccagaaagtcaaatttcaccagttgaagaactttctactttgaaagaaaaagct
aaccctcaagaggaatttgttaaacctccaaaacatatcaaaaacagtaataaaggggac
agaaaacatggtcagcccgagataattactcctagcaaaagaaaaatgtctgaagcatca
atgattgttcctggtgcagagagatacactgtgaggagtccaatacttttaatcaacaca
tcaacaccacaaagaggaagaattaaaccaccactgcaaatgacaagttctatggaaaaa
cctggtttttctaaaacatcggaaaatggagtggataatgctgtatcacttaaatctaga
ccatgtgaagaaagaaatagagaagataatacagacaaacatatcaaaactaaagttata
gaaaaggcagaaaataaggacattgaatacccaaaccaaaattttaatgaactccaggag
atagttcctgattcacaggcagtgggaaaaatagataaacctgtgttacctggtatttta
gacaatatctgtggaaataaaatgcactccaaatgggcatgttggacacctgtaacaaat
attaagctgtgtaataacctaagagcaagttcttcatcagaagacacatttaatcaagat
attattatcaacaaaaaccttactaaaaaaaaatcatcctcttcaatgtctgatgataat
tctgaggaaacgagtaaggtgcagtatgggaaagaactaatgcagcataacaaaatagat
aaagcagaagcagaagcttgcaaaagaaacaaacaacaacaactagatcattctaaacat
tcagaggagaaaaatactgaaaataccaagcagaatgattggcgtattgaatctgaaact
acttttaaatcagtactcctaaataagacagttgaagaatctgtgatctataggaagaag
tacacgttgtcaaaagatgtgaatactgctatttgtgataaaagcccttctcctagaaaa
aatacaaaaagtcatagaaaatcagggaaaagattgacgtctgaacttaattcctgggat
ttgaaacaaaaagaaatgagagaaaagtcaaaagggaaaggatttaatgatgcagccgaa
tcattgataagtcagattaataagagatacaaaccaaaggatggcacaaagtctacaaga
aaattaaaggagtctttaattgacagtggtttttcaaacaagtctgatctacagctcaga
aaggaaaaggttcagaaaaaaagttacagacaattgaagactacttttgttaatgttact
tctgaatgcccattgaatgatgtttacaattttaatttgagtggagctgatgagcctgtt
ataaaacttgggatccaggaatttcaagctacagctagagaagcctgcgtggatagtaca
ataacattggtaggtttaaggaatcatgatgaacttgaaacttctctcaaaaccaaagat
aaacgaactgtaacaaatcataagaagaaaactctctttagtgatactgacacagaatac
aaatgtgatgacagcaaaactgatattagctggctaagagaatcaaaatcgaaaccacag
ttaataggctacagcagaaataaaaatgtgaagaaacataaaagtgggaaatcaagatca
tctttggaaagggaacaaccaagatctaaaatgacacccgacaaaaacatcaccaaaaag
gtcgatgaaacagttccagatgggagaatcagacttccacgaagagcagcaaaaaccaaa
aaaaattataaagatctctcaaattcagaatcagagagtgaacaagaattttcacattca
tttaaagagaaattgctaataaaggagaatatccattccagaagcaaaaccatgaagccg
ccaaagaaacagaattccttctcttccgaaatgcaaaaggatatatcaaaagaatggaaa
aactcatctctactaaaagatactataagagataatagccttgacaaatctcctgtatct
ttatctgggagtccatcatctatagaagtaatgagatgtacagagaaaacgaccgaaaga
gattttactcaagattttgactatgtaacaaaatcactatcaccttatccaaaaacttca
tcacctgaatccttaaacagtggagttgaaagtccaataaattcacccaataacagtgag
aaaaacttactgtgtggaggagaaagttgctcaccaattccacaatcaggctttttggaa
agtcattcagcatctccactctccatggctagtgaaggaagagagaaaatatggggtggc
ctgccctgtgactccactcatggatcaggccctacactacatgttagtcggaaacgaatg
tacatagaaaaggatctgagtaattctgatgaagtagcattgggagagagagaggaggaa
agagcaagcttgcttcccaaaaaattatctaaaagtgaaggtacggattttcaaacttac
aaagtgtctgaaagtatatctccattatcaacaaatgacttttctattcctggggagaac
tggggaaatgaaatgtcagatgtcggaatgatgtatgagcagctcaatacagaatttagg
aggaaagttcatatccgccacaaaataatggattattttacgaagcattcttggaaaaca
gctcaacaacatataaaaacaatgaatcatcagattcaggagtatagaatcaaaaaactt
gacaaattccaattcatcatcataaaggagctggagaattttgaaaaagattcacagtcc
ttaaaagatttggagaaggaattagtgggcttttgggagaagatatttcagaagttcagt
gcctatcaaaaaagtgaacagcagaggcttcaccttttaaaagcttcgttgaacaagaat
gtcttctacaatactgattatgaagaaactatttttacttctgagatgtgttcaatgaaa
gaaaacatgaaaatgatacaagacaggcttcttaaggaaatgcaagaagaggagcttctt
aatgtgcgcagagggctaaagtcattattcatggctcatgaaagaaacaatgtgtga
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integrated database retrieval system
