KEGG   Sus scrofa (pig): 100156170Help
Entry
100156170         CDS       T01009                                 

Gene name
HDAC2
Definition
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04110  Cell cycle
ssc04213  Longevity regulating pathway - multiple species
ssc04330  Notch signaling pathway
ssc04919  Thyroid hormone signaling pathway
ssc05016  Huntington disease
ssc05034  Alcoholism
ssc05165  Human papillomavirus infection
ssc05169  Epstein-Barr virus infection
ssc05200  Pathways in cancer
ssc05202  Transcriptional misregulation in cancer
ssc05203  Viral carcinogenesis
ssc05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100156170 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100156170 (HDAC2)
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100156170 (HDAC2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    100156170 (HDAC2)
 09160 Human Diseases
  09161 Cancers
   05200 Pathways in cancer
    100156170 (HDAC2)
   05202 Transcriptional misregulation in cancers
    100156170 (HDAC2)
   05203 Viral carcinogenesis
    100156170 (HDAC2)
   05220 Chronic myeloid leukemia
    100156170 (HDAC2)
  09163 Neurodegenerative diseases
   05016 Huntington disease
    100156170 (HDAC2)
  09164 Substance dependence
   05034 Alcoholism
    100156170 (HDAC2)
  09167 Infectious diseases
   05169 Epstein-Barr virus infection
    100156170 (HDAC2)
   05165 Human papillomavirus infection
    100156170 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100156170 (HDAC2)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100156170 (HDAC2)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100156170 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     100156170 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100156170 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    100156170 (HDAC2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 100156170
NCBI-ProteinID: XP_001925353
Ensembl: ENSSSCG00000004432
UniProt: F1RZK8
LinkDB All DBs
Position
1
AA seq 488 aa AA seqDB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactactatgatggtgatatt
ggaaattattattatggacagggtcaccccatgaaacctcatagaatccgcatgacgcat
aacttgctgctaaattatggcttatatagaaagatggaaatatataggccccataaagcc
actgctgaagaaatgacaaaataccacagtgatgaatacatcaaatttctgcgttcaata
aggccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaggat
tgtccagtctttgatggactctttgaattttgtcagctttcaactggtggctcagttgct
ggggctgtgaagttaaaccgacaacaaactgatatggctgttaactgggctggaggatta
caccatgctaagaaatcagaagcatcaggattctgttatgttaatgatattgtgcttgcc
atccttgagttactaaagtatcatcagagagtcttatatattgatattgatatccatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgactgtatcattccat
aaatatggggaatactttcctggaacaggagacttgagggatattggtgcaggaaaaggc
aaatactatgctgtcaattttccaatgagagatggtatagatgatgaatcatatgggcag
atatttaaacctattatctcaaaagtgatggagatgtatcaacctagtgctgtggtgtta
caatgtggtgctgactcattatctggtgatagacttggttgcttcaatctgacagtcaaa
ggtcacgctaaatgtgtggaagttgtaaaaactttcaatttaccgttattaatgctggga
ggaggtggatacacaatccgtaatgttgctcgatgttggacatatgagaccgcagtcgcc
cttgattgtgagattcccaatgaattgccatataatgattactttgagtattttggaccg
gacttcaagctgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatttacgcatgttgcctcatgcacctggtgtc
caaatgcaagctattccagaagatgcagttcatgaagacagtggagatgaagatggagaa
gatccagacaagagaatttctattcgagcatcagacaaacggatagcgtgtgatgaagaa
ttctcagattcagaggacgaaggggaaggaggccgtagaaatgtggctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaggaaacagaggacaaaaaagcagat
gttaaggaagaagataaatccaaggacaatagtggtgaaaaaacagataccaaaggagcc
aaatcagaacagctcagcaacccttga

DBGET integrated database retrieval system