Sus scrofa (pig): 100512254
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Entry
100512254 CDS
T01009
Symbol
UBP1
Name
(RefSeq) upstream-binding protein 1 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100512254 (UBP1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
100512254 (UBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
SAM_1
Motif
Other DBs
NCBI-GeneID:
100512254
NCBI-ProteinID:
XP_003132142
Ensembl:
ENSSSCG00000011235
LinkDB
All DBs
Position
13:complement(19203965..19276392)
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AA seq
537 aa
AA seq
DB search
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDDETK
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKIGDVPEITGKLVKSIIRVV
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
DRKQKTDREKMEKRTAHEKEKYQPSYDTTVLTEMRLEPIIEDAVEHEQKKSSKRTLPADY
GDSLAKRGSCSPWPDTPTTYVNHSPSPAPTFSSPPQSTCSVPDSNSSSPNHQGDGVSQAS
SEQLQPSATIQETQQWLLKNRFSSYTRLFSNFLGADLLKLTKEDLVQICGTADGIRLYHS
LKSRSVRPRLTLYVCREQPVQQGQQQAAGGGGDSSSATPYVYHAIYLEEMVASEVARKLA
LVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAENGGGVHIILK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtgctcaagatggacgaggtgatcgagtctgggctggtgcacgacttcgac
gccagcctctcgggcatcgggcaggagctgggcgccggcgcctacagcatgagtgatgtc
ttggcattgcccattttcaagcaggaagattccagccttccattggatgatgaaactaaa
cacccgccctttcagtatgtgatgtgtgcagcaacatcaccagcagtaaagctacacgat
gaaacgctgacttacttgaaccaaggtcagtcttatgaaattcgaatgctggataatcgg
aaaataggagatgtgcctgagatcactgggaaactggtaaagagcatcataagagttgta
ttccatgacagacggctccagtatacagagcatcagcaacttgaaggttggaagtggaat
cgcccaggagacagacttcttgatttagatattccaatgtctgtgggaataattgataca
aggacaaatccaagccagttaaatgcagttgaatttctgtgggatcctgcaaaacgtaca
tctgctttcattcaggtgcactgcatcagcacagaatttactcccaggaagcacggaggt
gaaaagggagtgccttttaggatccaggttgacacctttaagcagaatgaaaatggagag
tacacagatcatctacactcagctagctgccaaatcaaagtttttaagcctaaaggtgca
gataggaaacaaaaaacagatcgagaaaagatggagaagagaactgctcatgagaaggag
aagtaccagccatcctatgacaccacggtcctcaccgagatgaggcttgagcctataatt
gaagatgcagttgaacatgagcagaaaaagtccagcaagcggactttgccagcagactac
ggtgattctctggcaaagcgaggcagttgttctccatggcctgatacccccacaacctac
gtgaaccacagcccatccccagcgcctaccttctcatccccaccacagagcacgtgcagc
gtcccagacagcaattcttcttccccaaatcatcagggagatggagtttcacaggcctct
agtgaacaactgcagccttcagccacaatccaggaaacacaacaatggctgctcaaaaac
agattctcttcctatacaagactgttctccaattttttaggtgccgacttactaaaactg
acaaaggaggatctagtacagatttgtggtacagccgatgggattcggctttatcattca
ctgaagtccaggtcggtgcggccccgcctgaccctctatgtctgccgcgagcagccagtg
cagcaggggcagcagcaggcagctggtggtgggggcgacagcagcagcgccacgccctac
gtttatcatgcaatctacttagaagaaatggttgcctcagaagttgctcgaaaacttgcg
ttggtgtttaatattcctctccaccaaattaaccaggtttacagacagggtcccactggt
attcacattcttgttagcgatcagatggttcagaattttcaagatgagagttgtttttta
ttctccacagtaaaagctgaaaacgggggtggtgtccacataattttgaagtga
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