Sus scrofa (pig): 100512749
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Entry
100512749 CDS
T01009
Gene name
SHH
Definition
(RefSeq) sonic hedgehog protein preproprotein
KO
K11988
sonic hedgehog
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04340
Hedgehog signaling pathway
ssc04360
Axon guidance
ssc05200
Pathways in cancer
ssc05205
Proteoglycans in cancer
ssc05217
Basal cell carcinoma
ssc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100512749 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100512749 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100512749 (SHH)
05205 Proteoglycans in cancer
100512749 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
100512749 (SHH)
05217 Basal cell carcinoma
100512749 (SHH)
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C46: hedgehog family
100512749 (SHH)
Glycosaminoglycan binding proteins [BR:
ssc00536
]
Heparan sulfate / Heparin
Morphogens
100512749 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
100512749
NCBI-ProteinID:
NP_001231442
Ensembl:
ENSSSCG00000016416
UniProt:
E2J596
LinkDB
All DBs
Position
18
AA seq
458 aa
AA seq
DB search
MLLLARCLLVMLISSLLLCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAFSVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSDFLT
FLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNNSAAWEPEALSGAGRPPGGAPG
RRALFASRVRPGQHVYVVAERGGDRRLLPAAVHSVTLREEATGAYAPLTAQGTILINRVL
ASCYAVIEEHSWAHRAFAPFRLAHALLAALAPSRTDRGGDGDGGGGGRVPPPAPAAPGVA
DAPGAVGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggcgagatgcctgctggtgatgctcatctcctccctgctcctgtgctcg
gggctggcgtgcggacccggcagggggttcgggaagaggcggcaccccaaaaaactgacc
cctttagcctacaagcagtttatccccaacgtggcggagaagaccctaggggccagcgga
agatacgaagggaagattacacgaaactcagagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaagaaaacactggagccgaccggctgatgactcag
agatgcaaggacaagctgaatgccttagccttctccgtgatgaaccagtggcccggagtg
aagctgcgggtgaccgagggctgggatgaggacggccaccactcggaggagtcgctgcat
tacgaaggccgcgcggtggacattaccacctcggaccgggatcgcagcaagtacggcatg
ctggcgcgcctggccgtggaggccggcttcgactgggtctactacgagtccaaagcgcac
atccactgctcggtgaaagcagagaactcggtggcggccaaatcgggcgggtgcttcccg
ggctcggccacggtgcacctcgagcagggcggcaccaagctggtgaaggacctgcgcccc
ggggaccgcgtgctggcggcagacgacgaaggccggctgctctacagcgacttcctcacc
ttcttggaccgcgacgacggcgccaagaaggtcttctacgtgatcgagacgagagagccc
cgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtcgcgccgcacaacaactcg
gccgcctgggagcccgaggcgctgtcgggcgccgggcggccgccggggggcgcgccggga
cgccgggcgctcttcgccagccgcgtgcgcccgggccagcacgtgtacgtggtggcagag
cgcggcggggaccgccggctgctgccggccgccgtgcacagcgtgacgctgcgcgaggag
gccaccggcgcgtacgcgccgctgacggcgcagggcaccatcctcatcaaccgggtgctg
gcgtcgtgctacgcggtcatagaggagcacagctgggcgcaccgggccttcgcgcccttc
cgcctggcgcacgcgctcctggccgcgctggcgccctcgcgcacggaccgcggcggggac
ggcgacggcgggggcggcggccgcgtccccccgcccgcgccggctgcgccaggggtggcc
gacgccccgggtgccgtgggcatccactggtactcgcagctgctctaccaaataggcacc
tggctgttggacagcgaggctttgcatccgctgggcatggcggtcaagtccagctga
DBGET
integrated database retrieval system
