Sus scrofa (pig): 100513988
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Entry
100513988 CDS
T01009
Symbol
ERC1
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X7
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100513988 (ERC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100513988 (ERC1)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Others
Others
100513988 (ERC1)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100513988 (ERC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
PKcGMP_CC
DUF5486
Motif
Other DBs
NCBI-GeneID:
100513988
NCBI-ProteinID:
XP_005664169
Ensembl:
ENSSSCG00000000755
LinkDB
All DBs
Position
5:68223722..68608705
Genome browser
AA seq
1123 aa
AA seq
DB search
MYGSARSVGKVESSNQSPGRSPRLPRSPRLGHRRTNSTGGSSGSSVGGGSGKTLSMENIQ
SLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGVRMTAMGSSPNIASSGVAS
DTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLS
SSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQR
DLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQ
TLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLDQKEKENALL
REEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE
EEMKQMEVYRSHSKFMKNKVEQLKEELNSKEAQGEELKKRAAGLQAEVFAIGQVKQELSR
KDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETM
LNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSL
KERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDL
KEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQL
KKAHEATLEARASPEMSDRIQQLEREIARYKDESSKAQAEVDRLLEILKEVENEKNDKDK
KIAELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDDLNDSSQQLQDSLR
KKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKA
KLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKK
TQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSHSNQTNHKPSPDQNIQPL
LELDQNRSKLKLYIGHLTALCHDRDPLILRGLTPPASYNLDDDQAAWENELQKMTQEQLQ
NELEKGERDNTELQEFANAVLQQIADHCPDILEQVVNALEESS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaagtgctcgctcagttgggaaggtggaatcaagcaaccagagccctgggcgt
tcacctaggcttccacgttcccctcgcttgggtcatcgtcgaaccaatagtacaggaggg
agttctggaagcagtgtcggaggtggcagtgggaaaaccctttcaatggagaatattcaa
tccttgaatgctgcctatgccacttctggccctatgtacctaagtgaccatgaaaatgtg
ggttcagaaacacctaaaagcaccatgacacttggccgatctggaggacgtctgccttat
ggtgtgaggatgactgccatgggcagtagccccaatatagcgagcagtggggttgctagt
gacactatcgcatttggagagcatcacctccctcctgtgagcatggcatctaccgttcct
cactctcttcgtcaggcaagagataatacaatcatggatcttcagacacagctgaaggaa
gtattaagagagaatgatctcttgcgaaaggatgtagaagtaaaggagagcaaattaagt
tcttcaatgaatagcatcaagaccttctggagcccagagctgaagaaagaacgagccctg
agaaaagatgaagcttccaaaatcactatttggaaggaacagtatagagttgtgcaggag
gaaaaccagcacatgcaaatgacaatccaggctctgcaggatgaattgcggatccagagg
gacctgaaccagctgtttcaacaagatagtagcagtaggactggtgaaccttgtgtggca
gagctgacggaggagaactttcagaggttgcatgctgagcatgagcgacaggccaaagaa
ctcttccttcttcgaaaaactctggaggaaatggaactacggattgagactcagaagcaa
accctgaatgctcgggatgaatccatcaagaagcttctggagatgttgcagagcaagggc
ctttctgctaaggctactgaggaagaccatgagagaacaaggagactggcagaggcagag
atgcacgtccatcacctagaaagccttttggaccagaaggaaaaagagaatgctctgttg
agagaggagatgcatcggagatttgagaatgccccggattctgccaaaactaaagctctg
caaactgttattgagatgaaggattcaaaaatttcctctatggagcgtgggctccgagac
ttggaagaagagattcagatgctgaaatcaaatggggctttgagtactgaggaacgagaa
gaagaaatgaagcaaatggaggtctatcgcagccattccaagtttatgaaaaataaggta
gagcaactgaaggaggagctaaattccaaagaggctcaaggggaggagctgaaaaagaga
gcggctggtcttcaggccgaggtctttgccattggtcaggtgaagcaggaattgtccagg
aaggacacagaactactagccctacagacaaagctagaaacactcacaaaccagttctca
gacagcaagcagcacattgaagtgttgaaggagtccttgacggctaaggagcagagggcc
gccatcctgcagactgaggtggatgctctgcggttgcgtttggaggagaaggaaaccatg
ctgaataagaagacaaaacagatccaggatatggctgaggagaaggggacacaagctgga
gagatccatgacctcaaggacatgctggatgtgaaggagcggaaagttaatgttttgcag
aagaagattgaaaatctccaagagcaacttagagataaggaaaagcagatgagcagcttg
aaggagcgagtcaaatcattgcaggctgacaccaccaacactgacactgccttgacaact
ttggaggaggcccttgcggagaaggagcggactattgaacgcttaaaggagcagcgggac
cgagatgagcgagaaaaacaggaggaaattgataactacaaaaaagatcttaaagatttg
aaagaaaaagtcagcctattgcaaggcgacctctcagagaaagaggcttcactcttggat
ctgaaagaacatgcttcttctctggcttcctcaggactgaaaaaggactcacggcttaag
acactagaaattgctttggagcagaagaaggaagagtgtctgaaaatggaatcacagttg
aaaaaggcacatgaggcaacattggaagccagagccagtccagagatgagtgatcgaata
cagcagttggagagagagattgccaggtacaaagatgaatctagcaaagcccaggcagaa
gttgaccgcctcttggaaatcttgaaggaggtggaaaatgagaagaacgacaaagataag
aagattgctgagttggaaagtctcacttcaaggcaggtgaaagaccagaataagaaggtg
gccaatctgaagcacaaggagcaggtggagaagaagaagagtgcccagatgctggaggag
gctcggcgccgggaagatgacctcaatgacagctcacagcagctgcaggacagtctccgt
aagaaggatgacaggattgaagagctggaagaagcattaagagaaagtgtacagataact
gcagagcgagagatggtgctggcacaagaggagtcagccaggaccaatgctgaaaaacag
gtggaggagttactgatggccatggagaaagtaaaacaggagctcgagtccatgaaagcg
aagctgtcctcaacgcagcagtcactggcagagaaggaaactcatttaaccaaccttcgg
gctgagagaaggaaacacttagaggaagttctggagatgaagcaggaagcccttctggcc
gccatcagtgagaaggatgccaacatagctcttttggagctttcgtcctccaagaaaaag
acccaggaggaagtggccgccctgaagcgggagaaggaccggctggtgcagcagctcaag
cagcagacacaaaatcgaatgaagctaatggcggacaattatgaggatgaccacttcaga
tcctcccattccaatcaaaccaatcataaaccctccccagaccagaacatccagcccctc
ttagaacttgaccaaaatagaagcaaactaaagttgtacattggacacctgacggccctc
tgccatgaccgagaccccctgatccttcgaggactcactccaccagcttcctacaacttg
gacgatgaccaggcagcgtgggagaatgagctacaaaagatgacccaggagcagcttcag
aacgagttagagaaaggtgagcgagataatacggagctgcaggagtttgccaacgccgtc
ctccagcagatagcagaccactgccccgacatcctggagcaggtggtcaatgcgctagaa
gagtcatcctga
DBGET
integrated database retrieval system
